Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 BX842568.3-201ENST00000418104 571 ntBASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 AL136162.1-201ENST00000607711 1078 ntBASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF103-CHMP3A0A140T963 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 AC024257.2-201ENST00000549699 147 ntBASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF103-CHMP3A0A140T963 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF103-CHMP3A0A140T963 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 FEM1AP1-201ENST00000431297 1995 ntBASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF103-CHMP3A0A140T963 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
RNF103-CHMP3A0A140T963 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF103-CHMP3A0A140T963 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF103-CHMP3A0A140T963 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC007952.6-201ENST00000573168 2673 ntBASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC003957.1-201ENST00000625108 2673 ntBASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 AC233992.3-201ENST00000607491 485 ntBASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF103-CHMP3A0A140T963 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF103-CHMP3A0A140T963 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms