Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 API5-201ENST00000378852 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 METTL2A-201ENST00000311506 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 GABRB3-201ENST00000299267 4494 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 CLDN19-203ENST00000539749 3517 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 GLOD4-201ENST00000301328 1809 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 HVCN1-201ENST00000242607 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AC006004.1-201ENST00000434887 2145 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 DDX25-202ENST00000525943 1646 ntTSL 5 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 GMEB1-203ENST00000373816 6410 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 NLRP3-205ENST00000391827 2940 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AC002480.2-201ENST00000435127 2432 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 NDUFB4-203ENST00000485064 1426 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TNFSF10-201ENST00000241261 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 INTS12-201ENST00000340139 1710 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 FPR2-202ENST00000598776 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AL035696.3-201ENST00000580119 2050 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 OR4K16P-202ENST00000641135 1506 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 NLRP12-203ENST00000391772 3205 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 GABRA1-204ENST00000437025 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 SCGB1D1-201ENST00000306238 453 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 SLC25A14-202ENST00000339231 1062 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 GRIK3-202ENST00000373093 2955 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 SHC3-201ENST00000375831 569 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC131235.1-201ENST00000433853 732 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 REG1CP-207ENST00000450249 569 ntTSL 4 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 VDAC1P12-201ENST00000451853 882 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC120036.1-201ENST00000479243 654 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC074276.1-201ENST00000486836 613 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 LINC02515-201ENST00000503677 536 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TMEM262-206ENST00000530719 494 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 EHF-209ENST00000531728 485 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AP001652.1-201ENST00000531918 643 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TSPAN31-205ENST00000547472 475 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC009779.5-201ENST00000556606 488 ntTSL 3 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 RN7SL744P-201ENST00000577604 267 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 SNORD3A-201ENST00000584923 699 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 LINC00663-204ENST00000588223 565 ntTSL 4 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 LINC01255-205ENST00000591318 708 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC027644.2-201ENST00000603786 240 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 LINC00649-217ENST00000616030 714 ntTSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 DANCR-205ENST00000623036 748 ntTSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TAF1B-211ENST00000625239 273 ntTSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 UBA7-201ENST00000333486 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 LINC01001-203ENST00000607448 1569 ntTSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AC008060.4-201ENST00000569431 1861 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 ENTPD3-201ENST00000301825 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 ARHGEF9-202ENST00000374870 4644 ntTSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AL590438.1-201ENST00000607061 3461 ntBASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TP53-209ENST00000504937 2271 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 TP53-224ENST00000619186 2271 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 FSHB-203ENST00000533718 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 PROM2-202ENST00000317668 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 ZBTB37-204ENST00000427304 2300 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 RPS6KA5-202ENST00000536315 2993 ntTSL 2 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 PGA4-201ENST00000378149 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 SYTL2-201ENST00000316356 4293 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
NPIPA3F8WFD2 AP003038.1-201ENST00000527289 1754 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 TERB1-202ENST00000433154 2446 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 PNPLA8-201ENST00000257694 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ARHGEF34P-201ENST00000483587 4532 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 MS4A3-202ENST00000358152 1516 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 NXPE1-202ENST00000424269 1896 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC097662.1-201ENST00000439598 2568 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 LINC01140-210ENST00000590653 3315 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 RABGAP1-213ENST00000616002 1595 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 CXADRP3-201ENST00000581457 1955 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 LINC01560-201ENST00000357412 1253 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 HLA-DRA-201ENST00000374982 1169 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 422.6 ms