RNA–Protein interactions for RNA: ENST00000398944.7

EIF3CL-202, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3CL, Length 3,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-202ENST00000398944 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
EIF3CL-202ENST00000398944 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
EIF3CL-202ENST00000398944 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
EIF3CL-202ENST00000398944 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
EIF3CL-202ENST00000398944 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
EIF3CL-202ENST00000398944 CCDC180Q9P1Z9 1646 aa18.44■□□□□ 0.54
EIF3CL-202ENST00000398944 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
EIF3CL-202ENST00000398944 HRCP23327 699 aa18.21■□□□□ 0.51
EIF3CL-202ENST00000398944 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
EIF3CL-202ENST00000398944 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
EIF3CL-202ENST00000398944 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.47
EIF3CL-202ENST00000398944 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
EIF3CL-202ENST00000398944 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
EIF3CL-202ENST00000398944 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.44
EIF3CL-202ENST00000398944 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
EIF3CL-202ENST00000398944 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
EIF3CL-202ENST00000398944 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.41
EIF3CL-202ENST00000398944 ABCC9O60706 1549 aa17.57■□□□□ 0.4
EIF3CL-202ENST00000398944 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
EIF3CL-202ENST00000398944 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.39
EIF3CL-202ENST00000398944 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
EIF3CL-202ENST00000398944 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
EIF3CL-202ENST00000398944 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
EIF3CL-202ENST00000398944 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
EIF3CL-202ENST00000398944 MYT1Q01538 1121 aa17.27■□□□□ 0.36
EIF3CL-202ENST00000398944 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
EIF3CL-202ENST00000398944 NACADO15069 1562 aa17.17■□□□□ 0.34
EIF3CL-202ENST00000398944 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
EIF3CL-202ENST00000398944 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
EIF3CL-202ENST00000398944 WIZO95785 1651 aa17.09■□□□□ 0.33
EIF3CL-202ENST00000398944 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
EIF3CL-202ENST00000398944 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
EIF3CL-202ENST00000398944 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
EIF3CL-202ENST00000398944 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
EIF3CL-202ENST00000398944 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
EIF3CL-202ENST00000398944 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
EIF3CL-202ENST00000398944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
EIF3CL-202ENST00000398944 YTHDC1Q96MU7 727 aaKnown RBP16.79■□□□□ 0.28
EIF3CL-202ENST00000398944 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
EIF3CL-202ENST00000398944 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
EIF3CL-202ENST00000398944 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
EIF3CL-202ENST00000398944 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
EIF3CL-202ENST00000398944 SOGA1O94964 1423 aa16.71■□□□□ 0.26
EIF3CL-202ENST00000398944 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
EIF3CL-202ENST00000398944 CCER1Q8TC90 406 aaPredicted RBP16.69■□□□□ 0.26
EIF3CL-202ENST00000398944 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
EIF3CL-202ENST00000398944 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
EIF3CL-202ENST00000398944 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
EIF3CL-202ENST00000398944 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
EIF3CL-202ENST00000398944 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
EIF3CL-202ENST00000398944 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
EIF3CL-202ENST00000398944 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
EIF3CL-202ENST00000398944 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
EIF3CL-202ENST00000398944 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
EIF3CL-202ENST00000398944 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
EIF3CL-202ENST00000398944 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
EIF3CL-202ENST00000398944 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
EIF3CL-202ENST00000398944 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
EIF3CL-202ENST00000398944 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
EIF3CL-202ENST00000398944 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
EIF3CL-202ENST00000398944 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
EIF3CL-202ENST00000398944 EEA1Q15075 1411 aa16.36■□□□□ 0.21
EIF3CL-202ENST00000398944 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
EIF3CL-202ENST00000398944 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
EIF3CL-202ENST00000398944 APLP2Q06481 763 aa16.3■□□□□ 0.2
EIF3CL-202ENST00000398944 CLIP1P30622 1438 aa16.28■□□□□ 0.2
EIF3CL-202ENST00000398944 ANP32EQ9BTT0 268 aa16.25■□□□□ 0.19
EIF3CL-202ENST00000398944 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
EIF3CL-202ENST00000398944 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
EIF3CL-202ENST00000398944 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
EIF3CL-202ENST00000398944 MIER1Q8N108 512 aa16.14■□□□□ 0.17
EIF3CL-202ENST00000398944 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
EIF3CL-202ENST00000398944 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
EIF3CL-202ENST00000398944 KIF21BO75037 1637 aa16.1■□□□□ 0.17
EIF3CL-202ENST00000398944 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.16
EIF3CL-202ENST00000398944 BCANQ96GW7 911 aa16.07■□□□□ 0.16
EIF3CL-202ENST00000398944 ITGAEP38570 1179 aa16.06■□□□□ 0.16
EIF3CL-202ENST00000398944 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
EIF3CL-202ENST00000398944 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
EIF3CL-202ENST00000398944 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
EIF3CL-202ENST00000398944 CUX1P39880 1505 aa15.98■□□□□ 0.15
EIF3CL-202ENST00000398944 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
EIF3CL-202ENST00000398944 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
EIF3CL-202ENST00000398944 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
EIF3CL-202ENST00000398944 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
EIF3CL-202ENST00000398944 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
EIF3CL-202ENST00000398944 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
EIF3CL-202ENST00000398944 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
EIF3CL-202ENST00000398944 CFTRP13569 1480 aa15.88■□□□□ 0.13
EIF3CL-202ENST00000398944 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
EIF3CL-202ENST00000398944 CUX2O14529 1486 aa15.86■□□□□ 0.13
EIF3CL-202ENST00000398944 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
EIF3CL-202ENST00000398944 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
EIF3CL-202ENST00000398944 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.13
EIF3CL-202ENST00000398944 IGF1RP08069 1367 aa15.82■□□□□ 0.12
EIF3CL-202ENST00000398944 ARHGAP35Q9NRY4 1499 aa15.81■□□□□ 0.12
EIF3CL-202ENST00000398944 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
EIF3CL-202ENST00000398944 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
EIF3CL-202ENST00000398944 CARMIL1Q5VZK9 1371 aa15.78■□□□□ 0.12
EIF3CL-202ENST00000398944 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms