RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
NLRP3-205ENST00000391827 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
NLRP3-205ENST00000391827 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
NLRP3-205ENST00000391827 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
NLRP3-205ENST00000391827 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
NLRP3-205ENST00000391827 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
NLRP3-205ENST00000391827 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
NLRP3-205ENST00000391827 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
NLRP3-205ENST00000391827 ABCC9O60706 1549 aa18.36■□□□□ 0.53
NLRP3-205ENST00000391827 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
NLRP3-205ENST00000391827 NACADO15069 1562 aa18.28■□□□□ 0.52
NLRP3-205ENST00000391827 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
NLRP3-205ENST00000391827 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
NLRP3-205ENST00000391827 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
NLRP3-205ENST00000391827 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
NLRP3-205ENST00000391827 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
NLRP3-205ENST00000391827 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
NLRP3-205ENST00000391827 WIZO95785 1651 aa17.69■□□□□ 0.42
NLRP3-205ENST00000391827 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
NLRP3-205ENST00000391827 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
NLRP3-205ENST00000391827 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
NLRP3-205ENST00000391827 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
NLRP3-205ENST00000391827 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
NLRP3-205ENST00000391827 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
NLRP3-205ENST00000391827 HRCP23327 699 aa17.49■□□□□ 0.39
NLRP3-205ENST00000391827 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
NLRP3-205ENST00000391827 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
NLRP3-205ENST00000391827 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
NLRP3-205ENST00000391827 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
NLRP3-205ENST00000391827 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
NLRP3-205ENST00000391827 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
NLRP3-205ENST00000391827 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
NLRP3-205ENST00000391827 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
NLRP3-205ENST00000391827 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
NLRP3-205ENST00000391827 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
NLRP3-205ENST00000391827 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
NLRP3-205ENST00000391827 EEA1Q15075 1411 aa17.1■□□□□ 0.33
NLRP3-205ENST00000391827 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
NLRP3-205ENST00000391827 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
NLRP3-205ENST00000391827 SOGA1O94964 1423 aa16.99■□□□□ 0.31
NLRP3-205ENST00000391827 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.3
NLRP3-205ENST00000391827 PPARGC1BQ86YN6 1023 aaKnown RBP16.95■□□□□ 0.3
NLRP3-205ENST00000391827 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
NLRP3-205ENST00000391827 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
NLRP3-205ENST00000391827 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
NLRP3-205ENST00000391827 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
NLRP3-205ENST00000391827 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
NLRP3-205ENST00000391827 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
NLRP3-205ENST00000391827 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
NLRP3-205ENST00000391827 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
NLRP3-205ENST00000391827 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
NLRP3-205ENST00000391827 KIF21BO75037 1637 aa16.86■□□□□ 0.29
NLRP3-205ENST00000391827 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
NLRP3-205ENST00000391827 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
NLRP3-205ENST00000391827 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
NLRP3-205ENST00000391827 MYT1Q01538 1121 aa16.77■□□□□ 0.28
NLRP3-205ENST00000391827 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
NLRP3-205ENST00000391827 CFTRP13569 1480 aa16.68■□□□□ 0.26
NLRP3-205ENST00000391827 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
NLRP3-205ENST00000391827 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
NLRP3-205ENST00000391827 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
NLRP3-205ENST00000391827 CLIP1P30622 1438 aa16.62■□□□□ 0.25
NLRP3-205ENST00000391827 CUX1P39880 1505 aa16.61■□□□□ 0.25
NLRP3-205ENST00000391827 PRXQ9BXM0 1461 aa16.59■□□□□ 0.25
NLRP3-205ENST00000391827 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.25
NLRP3-205ENST00000391827 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
NLRP3-205ENST00000391827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
NLRP3-205ENST00000391827 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
NLRP3-205ENST00000391827 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
NLRP3-205ENST00000391827 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
NLRP3-205ENST00000391827 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
NLRP3-205ENST00000391827 TTBK1Q5TCY1 1321 aaPredicted RBP16.4■□□□□ 0.22
NLRP3-205ENST00000391827 APLP2Q06481 763 aa16.35■□□□□ 0.21
NLRP3-205ENST00000391827 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
NLRP3-205ENST00000391827 CUX2O14529 1486 aa16.32■□□□□ 0.2
NLRP3-205ENST00000391827 IGF1RP08069 1367 aa16.31■□□□□ 0.2
NLRP3-205ENST00000391827 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
NLRP3-205ENST00000391827 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
NLRP3-205ENST00000391827 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
NLRP3-205ENST00000391827 CARMIL1Q5VZK9 1371 aa16.22■□□□□ 0.19
NLRP3-205ENST00000391827 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
NLRP3-205ENST00000391827 RANGAP1P46060 587 aaPredicted RBP16.22■□□□□ 0.19
NLRP3-205ENST00000391827 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
NLRP3-205ENST00000391827 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
NLRP3-205ENST00000391827 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
NLRP3-205ENST00000391827 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
NLRP3-205ENST00000391827 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
NLRP3-205ENST00000391827 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
NLRP3-205ENST00000391827 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
NLRP3-205ENST00000391827 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.18
NLRP3-205ENST00000391827 CUL7Q14999 1698 aa16.14■□□□□ 0.17
NLRP3-205ENST00000391827 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
NLRP3-205ENST00000391827 NESP48681 1621 aa16.12■□□□□ 0.17
NLRP3-205ENST00000391827 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
NLRP3-205ENST00000391827 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
NLRP3-205ENST00000391827 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
NLRP3-205ENST00000391827 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
NLRP3-205ENST00000391827 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
NLRP3-205ENST00000391827 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
NLRP3-205ENST00000391827 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms