RNA–Protein interactions for RNA: ENST00000333486.3

UBA7-201, Transcript of ubiquitin like modifier activating enzyme 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA7, Length 3,299 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA7-201ENST00000333486 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
UBA7-201ENST00000333486 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
UBA7-201ENST00000333486 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
UBA7-201ENST00000333486 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
UBA7-201ENST00000333486 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.6
UBA7-201ENST00000333486 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
UBA7-201ENST00000333486 ABCC9O60706 1549 aa18.73■□□□□ 0.59
UBA7-201ENST00000333486 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
UBA7-201ENST00000333486 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
UBA7-201ENST00000333486 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
UBA7-201ENST00000333486 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
UBA7-201ENST00000333486 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
UBA7-201ENST00000333486 NACADO15069 1562 aa17.73■□□□□ 0.43
UBA7-201ENST00000333486 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.42
UBA7-201ENST00000333486 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
UBA7-201ENST00000333486 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.41
UBA7-201ENST00000333486 PCGF6Q9BYE7 350 aa17.58■□□□□ 0.4
UBA7-201ENST00000333486 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
UBA7-201ENST00000333486 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.39
UBA7-201ENST00000333486 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
UBA7-201ENST00000333486 TRIM41Q8WV44 630 aa17.5■□□□□ 0.39
UBA7-201ENST00000333486 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
UBA7-201ENST00000333486 HRCP23327 699 aa17.32■□□□□ 0.36
UBA7-201ENST00000333486 WIZO95785 1651 aa17.27■□□□□ 0.36
UBA7-201ENST00000333486 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
UBA7-201ENST00000333486 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
UBA7-201ENST00000333486 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
UBA7-201ENST00000333486 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
UBA7-201ENST00000333486 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
UBA7-201ENST00000333486 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
UBA7-201ENST00000333486 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
UBA7-201ENST00000333486 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
UBA7-201ENST00000333486 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
UBA7-201ENST00000333486 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
UBA7-201ENST00000333486 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
UBA7-201ENST00000333486 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
UBA7-201ENST00000333486 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
UBA7-201ENST00000333486 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
UBA7-201ENST00000333486 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
UBA7-201ENST00000333486 SOGA1O94964 1423 aa16.76■□□□□ 0.27
UBA7-201ENST00000333486 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
UBA7-201ENST00000333486 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
UBA7-201ENST00000333486 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
UBA7-201ENST00000333486 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
UBA7-201ENST00000333486 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
UBA7-201ENST00000333486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
UBA7-201ENST00000333486 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
UBA7-201ENST00000333486 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
UBA7-201ENST00000333486 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
UBA7-201ENST00000333486 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
UBA7-201ENST00000333486 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
UBA7-201ENST00000333486 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
UBA7-201ENST00000333486 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
UBA7-201ENST00000333486 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
UBA7-201ENST00000333486 EEA1Q15075 1411 aa16.48■□□□□ 0.23
UBA7-201ENST00000333486 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
UBA7-201ENST00000333486 NESP48681 1621 aa16.4■□□□□ 0.22
UBA7-201ENST00000333486 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
UBA7-201ENST00000333486 APLP2Q06481 763 aa16.34■□□□□ 0.21
UBA7-201ENST00000333486 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
UBA7-201ENST00000333486 CLIP1P30622 1438 aa16.33■□□□□ 0.2
UBA7-201ENST00000333486 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
UBA7-201ENST00000333486 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
UBA7-201ENST00000333486 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
UBA7-201ENST00000333486 KIF21BO75037 1637 aa16.22■□□□□ 0.19
UBA7-201ENST00000333486 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
UBA7-201ENST00000333486 CFTRP13569 1480 aa16.21■□□□□ 0.19
UBA7-201ENST00000333486 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
UBA7-201ENST00000333486 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
UBA7-201ENST00000333486 CUX1P39880 1505 aa16.16■□□□□ 0.18
UBA7-201ENST00000333486 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
UBA7-201ENST00000333486 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
UBA7-201ENST00000333486 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
UBA7-201ENST00000333486 ATP1B4Q9UN42 357 aaPredicted RBP16.09■□□□□ 0.17
UBA7-201ENST00000333486 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.17
UBA7-201ENST00000333486 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
UBA7-201ENST00000333486 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
UBA7-201ENST00000333486 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
UBA7-201ENST00000333486 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
UBA7-201ENST00000333486 CUX2O14529 1486 aa16.06■□□□□ 0.16
UBA7-201ENST00000333486 ITGAEP38570 1179 aa16.03■□□□□ 0.16
UBA7-201ENST00000333486 FBLN2P98095 1184 aa16.02■□□□□ 0.16
UBA7-201ENST00000333486 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
UBA7-201ENST00000333486 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
UBA7-201ENST00000333486 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
UBA7-201ENST00000333486 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
UBA7-201ENST00000333486 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
UBA7-201ENST00000333486 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
UBA7-201ENST00000333486 IGF1RP08069 1367 aa15.95■□□□□ 0.14
UBA7-201ENST00000333486 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
UBA7-201ENST00000333486 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
UBA7-201ENST00000333486 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
UBA7-201ENST00000333486 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
UBA7-201ENST00000333486 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
UBA7-201ENST00000333486 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
UBA7-201ENST00000333486 ARHGAP35Q9NRY4 1499 aa15.9■□□□□ 0.14
UBA7-201ENST00000333486 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
UBA7-201ENST00000333486 YTHDC1Q96MU7 727 aaKnown RBP15.88■□□□□ 0.13
UBA7-201ENST00000333486 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
UBA7-201ENST00000333486 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms