RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
CDH7-202ENST00000397968 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
CDH7-202ENST00000397968 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
CDH7-202ENST00000397968 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
CDH7-202ENST00000397968 MYT1Q01538 1121 aa15.47■□□□□ 0.07
CDH7-202ENST00000397968 APLP2Q06481 763 aa15.44■□□□□ 0.06
CDH7-202ENST00000397968 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
CDH7-202ENST00000397968 CCER1Q8TC90 406 aaPredicted RBP15.35■□□□□ 0.05
CDH7-202ENST00000397968 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
CDH7-202ENST00000397968 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
CDH7-202ENST00000397968 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
CDH7-202ENST00000397968 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
CDH7-202ENST00000397968 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
CDH7-202ENST00000397968 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
CDH7-202ENST00000397968 NEFLP07196 543 aa14.89□□□□□ -0.03
CDH7-202ENST00000397968 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
CDH7-202ENST00000397968 TRIM26Q12899 539 aaPredicted RBP14.67□□□□□ -0.06
CDH7-202ENST00000397968 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
CDH7-202ENST00000397968 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.07
CDH7-202ENST00000397968 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
CDH7-202ENST00000397968 HRCP23327 699 aa14.52□□□□□ -0.09
CDH7-202ENST00000397968 DAXXQ9UER7 740 aaPredicted RBP14.51□□□□□ -0.09
CDH7-202ENST00000397968 ATP1B4Q9UN42 357 aaPredicted RBP14.43□□□□□ -0.1
CDH7-202ENST00000397968 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
CDH7-202ENST00000397968 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
CDH7-202ENST00000397968 DIEXFQ68CQ4 756 aaKnown RBP14.17□□□□□ -0.14
CDH7-202ENST00000397968 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
CDH7-202ENST00000397968 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
CDH7-202ENST00000397968 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
CDH7-202ENST00000397968 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
CDH7-202ENST00000397968 ITGAEP38570 1179 aa13.97□□□□□ -0.17
CDH7-202ENST00000397968 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
CDH7-202ENST00000397968 CDK11AQ9UQ88 783 aaPredicted RBP13.94□□□□□ -0.18
CDH7-202ENST00000397968 LOC105371045A0A1W2PR82 267 aa13.94□□□□□ -0.18
CDH7-202ENST00000397968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CDH7-202ENST00000397968 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
CDH7-202ENST00000397968 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
CDH7-202ENST00000397968 ANP32CO43423 234 aa13.89□□□□□ -0.19
CDH7-202ENST00000397968 GTF3C3Q9Y5Q9 886 aa13.85□□□□□ -0.19
CDH7-202ENST00000397968 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.2
CDH7-202ENST00000397968 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.21
CDH7-202ENST00000397968 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
CDH7-202ENST00000397968 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
CDH7-202ENST00000397968 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
CDH7-202ENST00000397968 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
CDH7-202ENST00000397968 GLIPR1L2Q4G1C9 344 aa13.68□□□□□ -0.22
CDH7-202ENST00000397968 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
CDH7-202ENST00000397968 ANP32BQ92688 251 aaKnown RBP13.66□□□□□ -0.22
CDH7-202ENST00000397968 NEFMP07197 916 aa13.65□□□□□ -0.22
CDH7-202ENST00000397968 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
CDH7-202ENST00000397968 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
CDH7-202ENST00000397968 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
CDH7-202ENST00000397968 UPF2Q9HAU5 1272 aaKnown RBP13.57□□□□□ -0.24
CDH7-202ENST00000397968 BCANQ96GW7 911 aa13.56□□□□□ -0.24
CDH7-202ENST00000397968 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
CDH7-202ENST00000397968 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
CDH7-202ENST00000397968 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
CDH7-202ENST00000397968 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
CDH7-202ENST00000397968 HSP90AA1P07900 732 aaKnown RBP13.43□□□□□ -0.26
CDH7-202ENST00000397968 ANP32EQ9BTT0 268 aa13.4□□□□□ -0.26
CDH7-202ENST00000397968 FKBP8Q14318 412 aa13.4□□□□□ -0.26
CDH7-202ENST00000397968 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
CDH7-202ENST00000397968 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
CDH7-202ENST00000397968 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH7-202ENST00000397968 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
CDH7-202ENST00000397968 ABCC9O60706 1549 aa13.31□□□□□ -0.28
CDH7-202ENST00000397968 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
CDH7-202ENST00000397968 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
CDH7-202ENST00000397968 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
CDH7-202ENST00000397968 EEA1Q15075 1411 aa13.28□□□□□ -0.28
CDH7-202ENST00000397968 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
CDH7-202ENST00000397968 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
CDH7-202ENST00000397968 BECN1Q14457 450 aa13.24□□□□□ -0.29
CDH7-202ENST00000397968 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.3
CDH7-202ENST00000397968 SCRIBQ14160 1630 aa13.2□□□□□ -0.3
CDH7-202ENST00000397968 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
CDH7-202ENST00000397968 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
CDH7-202ENST00000397968 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
CDH7-202ENST00000397968 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
CDH7-202ENST00000397968 MYH16Q9H6N6 1097 aa13.17□□□□□ -0.3
CDH7-202ENST00000397968 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDH7-202ENST00000397968 FBLN2P98095 1184 aa13.16□□□□□ -0.3
CDH7-202ENST00000397968 MRS2Q9HD23 443 aa13.15□□□□□ -0.3
CDH7-202ENST00000397968 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.31
CDH7-202ENST00000397968 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
CDH7-202ENST00000397968 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
CDH7-202ENST00000397968 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
CDH7-202ENST00000397968 GOLGA3Q08378 1498 aa13.13□□□□□ -0.31
CDH7-202ENST00000397968 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
CDH7-202ENST00000397968 NBR1Q14596 966 aa13.12□□□□□ -0.31
CDH7-202ENST00000397968 CLIP1P30622 1438 aa13.12□□□□□ -0.31
CDH7-202ENST00000397968 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
CDH7-202ENST00000397968 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
CDH7-202ENST00000397968 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
CDH7-202ENST00000397968 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
CDH7-202ENST00000397968 NCLP19338 710 aaKnown RBP13.1□□□□□ -0.31
CDH7-202ENST00000397968 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
CDH7-202ENST00000397968 TSPY4P0CV99 314 aa13.08□□□□□ -0.31
CDH7-202ENST00000397968 TSPY10P0CW01 314 aa13.08□□□□□ -0.31
CDH7-202ENST00000397968 BCL11AQ9H165 835 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms