RNA–Protein interactions for RNA: ENST00000317668.8

PROM2-202, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 3,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-202ENST00000317668 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
PROM2-202ENST00000317668 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
PROM2-202ENST00000317668 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
PROM2-202ENST00000317668 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.51
PROM2-202ENST00000317668 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
PROM2-202ENST00000317668 ABCC9O60706 1549 aa17.49■□□□□ 0.39
PROM2-202ENST00000317668 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
PROM2-202ENST00000317668 HRCP23327 699 aa17.22■□□□□ 0.35
PROM2-202ENST00000317668 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
PROM2-202ENST00000317668 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
PROM2-202ENST00000317668 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
PROM2-202ENST00000317668 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
PROM2-202ENST00000317668 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
PROM2-202ENST00000317668 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
PROM2-202ENST00000317668 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
PROM2-202ENST00000317668 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
PROM2-202ENST00000317668 CCDC180Q9P1Z9 1646 aa16.65■□□□□ 0.26
PROM2-202ENST00000317668 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
PROM2-202ENST00000317668 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
PROM2-202ENST00000317668 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
PROM2-202ENST00000317668 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
PROM2-202ENST00000317668 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
PROM2-202ENST00000317668 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
PROM2-202ENST00000317668 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
PROM2-202ENST00000317668 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
PROM2-202ENST00000317668 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
PROM2-202ENST00000317668 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
PROM2-202ENST00000317668 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
PROM2-202ENST00000317668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
PROM2-202ENST00000317668 APLP2Q06481 763 aa16.07■□□□□ 0.16
PROM2-202ENST00000317668 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
PROM2-202ENST00000317668 NACADO15069 1562 aa16.05■□□□□ 0.16
PROM2-202ENST00000317668 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
PROM2-202ENST00000317668 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
PROM2-202ENST00000317668 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
PROM2-202ENST00000317668 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
PROM2-202ENST00000317668 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
PROM2-202ENST00000317668 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
PROM2-202ENST00000317668 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.13
PROM2-202ENST00000317668 ITGAEP38570 1179 aa15.88■□□□□ 0.13
PROM2-202ENST00000317668 DIEXFQ68CQ4 756 aaKnown RBP15.86■□□□□ 0.13
PROM2-202ENST00000317668 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
PROM2-202ENST00000317668 FBLN2P98095 1184 aa15.75■□□□□ 0.11
PROM2-202ENST00000317668 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
PROM2-202ENST00000317668 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
PROM2-202ENST00000317668 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
PROM2-202ENST00000317668 ARID3CA6NKF2 412 aa15.57■□□□□ 0.08
PROM2-202ENST00000317668 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
PROM2-202ENST00000317668 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
PROM2-202ENST00000317668 CNGB1Q14028 1251 aaPredicted RBP15.51■□□□□ 0.07
PROM2-202ENST00000317668 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
PROM2-202ENST00000317668 WIZO95785 1651 aa15.49■□□□□ 0.07
PROM2-202ENST00000317668 MIER1Q8N108 512 aa15.49■□□□□ 0.07
PROM2-202ENST00000317668 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
PROM2-202ENST00000317668 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
PROM2-202ENST00000317668 MYT1Q01538 1121 aa15.36■□□□□ 0.05
PROM2-202ENST00000317668 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
PROM2-202ENST00000317668 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
PROM2-202ENST00000317668 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
PROM2-202ENST00000317668 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
PROM2-202ENST00000317668 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
PROM2-202ENST00000317668 SOGA1O94964 1423 aa15.26■□□□□ 0.03
PROM2-202ENST00000317668 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
PROM2-202ENST00000317668 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
PROM2-202ENST00000317668 POLR3GLQ9BT43 218 aa15.26■□□□□ 0.03
PROM2-202ENST00000317668 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
PROM2-202ENST00000317668 BCANQ96GW7 911 aa15.2■□□□□ 0.02
PROM2-202ENST00000317668 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
PROM2-202ENST00000317668 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
PROM2-202ENST00000317668 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
PROM2-202ENST00000317668 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
PROM2-202ENST00000317668 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
PROM2-202ENST00000317668 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
PROM2-202ENST00000317668 HIRIP3Q9BW71 556 aaPredicted RBP15.13■□□□□ 0.01
PROM2-202ENST00000317668 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
PROM2-202ENST00000317668 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
PROM2-202ENST00000317668 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
PROM2-202ENST00000317668 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
PROM2-202ENST00000317668 NESP48681 1621 aa15.05■□□□□ 0
PROM2-202ENST00000317668 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
PROM2-202ENST00000317668 CUX2O14529 1486 aa15.03■□□□□ -0
PROM2-202ENST00000317668 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
PROM2-202ENST00000317668 TRIM52Q96A61 297 aa15.01□□□□□ -0.01
PROM2-202ENST00000317668 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
PROM2-202ENST00000317668 KCNH8Q96L42 1107 aa15.01□□□□□ -0.01
PROM2-202ENST00000317668 NEFLP07196 543 aa15□□□□□ -0.01
PROM2-202ENST00000317668 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
PROM2-202ENST00000317668 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
PROM2-202ENST00000317668 CLIP1P30622 1438 aa14.98□□□□□ -0.01
PROM2-202ENST00000317668 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
PROM2-202ENST00000317668 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
PROM2-202ENST00000317668 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
PROM2-202ENST00000317668 DDX10Q13206 875 aaKnown RBP14.94□□□□□ -0.02
PROM2-202ENST00000317668 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
PROM2-202ENST00000317668 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
PROM2-202ENST00000317668 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
PROM2-202ENST00000317668 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
PROM2-202ENST00000317668 FKBP8Q14318 412 aa14.91□□□□□ -0.02
PROM2-202ENST00000317668 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
PROM2-202ENST00000317668 EEA1Q15075 1411 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms