Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDHGB4Q9UN71 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 AC131281.2-201ENST00000520478 145 ntBASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB4Q9UN71 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGB4Q9UN71 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 AC026471.6-201ENST00000622954 1905 ntBASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB4Q9UN71 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 SLC47A1P1-202ENST00000449666 945 ntBASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 AP004607.7-201ENST00000527152 1677 ntBASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB4Q9UN71 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGB4Q9UN71 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms