Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 AL050303.2-201ENST00000619798 666 ntBASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G1Q9HCP0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 AC005181.1-201ENST00000604782 1256 ntBASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 AC079834.2-201ENST00000609776 1949 ntBASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 AC068338.2-201ENST00000563278 1430 ntBASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G1Q9HCP0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 MIR663A-201ENST00000385250 93 ntBASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G1Q9HCP0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.02■■□□□ 1.11
CSNK1G1Q9HCP0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.02■■□□□ 1.11
CSNK1G1Q9HCP0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CSNK1G1Q9HCP0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 NCF1B-203ENST00000435988 1254 ntBASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 AC006970.2-201ENST00000450065 779 ntBASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CSNK1G1Q9HCP0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 AC245052.3-201ENST00000450182 901 ntBASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 AL162412.1-201ENST00000567129 965 ntBASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22■■□□□ 1.11
CSNK1G1Q9HCP0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 AC091799.1-201ENST00000422823 811 ntBASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CSNK1G1Q9HCP0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 ID1-201ENST00000376105 1233 ntBASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G1Q9HCP0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms