Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S3Q96PC3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S3Q96PC3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 TSPY13P-201ENST00000338964 914 ntBASIC15.78■□□□□ 0.12
AP1S3Q96PC3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.78■□□□□ 0.12
AP1S3Q96PC3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S3Q96PC3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 MIR6722-201ENST00000617286 78 ntBASIC15.77■□□□□ 0.12
AP1S3Q96PC3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.77■□□□□ 0.12
AP1S3Q96PC3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP1S3Q96PC3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 CA15P2-201ENST00000611168 834 ntBASIC15.76■□□□□ 0.11
AP1S3Q96PC3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.76■□□□□ 0.11
AP1S3Q96PC3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP1S3Q96PC3 AC004687.1-201ENST00000579003 1625 ntBASIC15.76■□□□□ 0.11
AP1S3Q96PC3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 YBX1P4-201ENST00000392794 808 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms