Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN4Q96NZ1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FOXN4Q96NZ1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN4Q96NZ1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN4Q96NZ1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 MIR572-201ENST00000384983 95 ntBASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.73■□□□□ 0.59
FOXN4Q96NZ1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 MIR6084-201ENST00000622012 110 ntBASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 BX005040.4-201ENST00000637145 1518 ntBASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXN4Q96NZ1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 AC055733.4-201ENST00000638462 1354 ntBASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 AC005224.4-201ENST00000583262 1652 ntBASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 AC009237.3-201ENST00000393279 1427 ntBASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXN4Q96NZ1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
FOXN4Q96NZ1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXN4Q96NZ1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms