Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.54■■□□□ 1.04
SNF8Q96H20 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.54■■□□□ 1.04
SNF8Q96H20 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.54■■□□□ 1.04
SNF8Q96H20 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 SMUG1P1-201ENST00000590640 811 ntBASIC21.54■■□□□ 1.04
SNF8Q96H20 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNF8Q96H20 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
SNF8Q96H20 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.54■■□□□ 1.04
SNF8Q96H20 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.53■■□□□ 1.04
SNF8Q96H20 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SNF8Q96H20 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNF8Q96H20 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SNF8Q96H20 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNF8Q96H20 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
SNF8Q96H20 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.53■■□□□ 1.04
SNF8Q96H20 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.53■■□□□ 1.04
SNF8Q96H20 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.53■■□□□ 1.04
SNF8Q96H20 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNF8Q96H20 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SNF8Q96H20 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNF8Q96H20 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SNF8Q96H20 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.52■■□□□ 1.04
SNF8Q96H20 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SNF8Q96H20 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.52■■□□□ 1.04
SNF8Q96H20 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SNF8Q96H20 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SNF8Q96H20 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.52■■□□□ 1.04
SNF8Q96H20 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.52■■□□□ 1.04
SNF8Q96H20 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.52■■□□□ 1.04
SNF8Q96H20 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNF8Q96H20 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SNF8Q96H20 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SNF8Q96H20 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SNF8Q96H20 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.52■■□□□ 1.03
SNF8Q96H20 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNF8Q96H20 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
SNF8Q96H20 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.51■■□□□ 1.03
SNF8Q96H20 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNF8Q96H20 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNF8Q96H20 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
SNF8Q96H20 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.5■■□□□ 1.03
SNF8Q96H20 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.5■■□□□ 1.03
SNF8Q96H20 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.5■■□□□ 1.03
SNF8Q96H20 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SNF8Q96H20 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNF8Q96H20 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNF8Q96H20 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNF8Q96H20 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNF8Q96H20 AC121338.2-201ENST00000622535 1744 ntBASIC21.49■■□□□ 1.03
SNF8Q96H20 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.49■■□□□ 1.03
SNF8Q96H20 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNF8Q96H20 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNF8Q96H20 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.49■■□□□ 1.03
SNF8Q96H20 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.49■■□□□ 1.03
SNF8Q96H20 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.49■■□□□ 1.03
SNF8Q96H20 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.49■■□□□ 1.03
SNF8Q96H20 AC131212.1-201ENST00000613771 668 ntBASIC21.49■■□□□ 1.03
SNF8Q96H20 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNF8Q96H20 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNF8Q96H20 AL121603.2-201ENST00000557373 2117 ntBASIC21.49■■□□□ 1.03
SNF8Q96H20 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNF8Q96H20 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.48■■□□□ 1.03
SNF8Q96H20 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNF8Q96H20 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.48■■□□□ 1.03
SNF8Q96H20 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNF8Q96H20 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNF8Q96H20 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SNF8Q96H20 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNF8Q96H20 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SNF8Q96H20 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SNF8Q96H20 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.48■■□□□ 1.03
SNF8Q96H20 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SNF8Q96H20 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.48■■□□□ 1.03
SNF8Q96H20 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNF8Q96H20 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.48■■□□□ 1.03
SNF8Q96H20 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
SNF8Q96H20 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNF8Q96H20 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms