Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 INGX-201ENST00000359239 846 ntBASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 DRD5P2-201ENST00000421395 2012 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 AL390719.1-204ENST00000412397 1219 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 AL390719.2-201ENST00000606993 987 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 FAM86EP-206ENST00000510506 987 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 CKBP1-201ENST00000565489 1086 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 AL022069.1-201ENST00000568025 1636 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 AF186192.3-201ENST00000583427 947 ntBASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYNE2Q8WXH0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 CALY-203ENST00000368558 825 ntTSL 5 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 LINC01238-205ENST00000567549 1107 ntBASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 FAM220CP-201ENST00000395253 831 ntBASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 FAM197Y1-201ENST00000421178 764 ntBASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 AC117500.6-201ENST00000624871 588 ntBASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SYNE2Q8WXH0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 MIR1233-2-201ENST00000408138 82 ntBASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 MIR1233-1-201ENST00000408722 82 ntBASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 PGM5P4-201ENST00000421970 445 ntBASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 AC004687.1-201ENST00000579003 1625 ntBASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 AC128688.1-201ENST00000487626 519 ntBASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SYNE2Q8WXH0 UNC93B2-201ENST00000285383 730 ntBASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 AL035633.1-201ENST00000406139 838 ntBASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 MESTP1-201ENST00000404287 994 ntBASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms