Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH11Q8TC12 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 AC121338.2-201ENST00000622535 1744 ntBASIC20.61■□□□□ 0.89
RDH11Q8TC12 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RDH11Q8TC12 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RDH11Q8TC12 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.6■□□□□ 0.89
RDH11Q8TC12 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.6■□□□□ 0.89
RDH11Q8TC12 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.6■□□□□ 0.89
RDH11Q8TC12 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.6■□□□□ 0.89
RDH11Q8TC12 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RDH11Q8TC12 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RDH11Q8TC12 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RDH11Q8TC12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RDH11Q8TC12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RDH11Q8TC12 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.59■□□□□ 0.89
RDH11Q8TC12 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 AC073314.1-201ENST00000568729 2216 ntBASIC20.59■□□□□ 0.89
RDH11Q8TC12 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RDH11Q8TC12 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RDH11Q8TC12 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RDH11Q8TC12 AC055733.4-201ENST00000638462 1354 ntBASIC20.59■□□□□ 0.89
RDH11Q8TC12 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RDH11Q8TC12 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RDH11Q8TC12 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
RDH11Q8TC12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.58■□□□□ 0.89
RDH11Q8TC12 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RDH11Q8TC12 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RDH11Q8TC12 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RDH11Q8TC12 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RDH11Q8TC12 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RDH11Q8TC12 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.58■□□□□ 0.88
RDH11Q8TC12 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH11Q8TC12 AC092667.1-201ENST00000434301 2586 ntBASIC20.57■□□□□ 0.88
RDH11Q8TC12 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH11Q8TC12 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RDH11Q8TC12 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RDH11Q8TC12 AC233992.3-201ENST00000607491 485 ntBASIC20.57■□□□□ 0.88
RDH11Q8TC12 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RDH11Q8TC12 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH11Q8TC12 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH11Q8TC12 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.56■□□□□ 0.88
RDH11Q8TC12 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RDH11Q8TC12 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RDH11Q8TC12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms