Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF546Q86UE3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF546Q86UE3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF546Q86UE3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ZNF546Q86UE3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF546Q86UE3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 U85056.1-201ENST00000616429 682 ntBASIC17.39■□□□□ 0.37
ZNF546Q86UE3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF546Q86UE3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 AF131216.4-201ENST00000638924 1588 ntBASIC17.38■□□□□ 0.37
ZNF546Q86UE3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF546Q86UE3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 MIR4281-201ENST00000580852 62 ntBASIC17.37■□□□□ 0.37
ZNF546Q86UE3 THA1P-201ENST00000590384 1145 ntBASIC17.37■□□□□ 0.37
ZNF546Q86UE3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 AC112907.3-201ENST00000577781 2400 ntBASIC17.37■□□□□ 0.37
ZNF546Q86UE3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF546Q86UE3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 AC004687.1-201ENST00000579003 1625 ntBASIC17.36■□□□□ 0.37
ZNF546Q86UE3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 KRT18P60-201ENST00000312876 1297 ntBASIC17.36■□□□□ 0.37
ZNF546Q86UE3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms