Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRK2Q5S007 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRK2Q5S007 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRK2Q5S007 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRK2Q5S007 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRK2Q5S007 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRK2Q5S007 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRK2Q5S007 OR7E47P-201ENST00000546390 1422 ntBASIC18.44■□□□□ 0.54
LRRK2Q5S007 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRK2Q5S007 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRK2Q5S007 MIR6786-201ENST00000616843 113 ntBASIC18.44■□□□□ 0.54
LRRK2Q5S007 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRK2Q5S007 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRK2Q5S007 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRK2Q5S007 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRRK2Q5S007 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRK2Q5S007 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRK2Q5S007 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRK2Q5S007 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
LRRK2Q5S007 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRK2Q5S007 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRK2Q5S007 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRK2Q5S007 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LRRK2Q5S007 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRK2Q5S007 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRRK2Q5S007 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRK2Q5S007 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRK2Q5S007 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 KRT126P-201ENST00000549467 1181 ntBASIC18.41■□□□□ 0.54
LRRK2Q5S007 TPM4P1-201ENST00000436100 807 ntBASIC18.41■□□□□ 0.54
LRRK2Q5S007 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRK2Q5S007 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRRK2Q5S007 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 AP003733.4-201ENST00000623785 1697 ntBASIC18.4■□□□□ 0.54
LRRK2Q5S007 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRK2Q5S007 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRK2Q5S007 AC053503.5-201ENST00000601508 636 ntBASIC18.4■□□□□ 0.54
LRRK2Q5S007 AL023875.1-201ENST00000640777 796 ntBASIC18.4■□□□□ 0.54
LRRK2Q5S007 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
LRRK2Q5S007 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms