Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TUBA4AP68366 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.58■□□□□ 0.73
TUBA4AP68366 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TUBA4AP68366 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA4AP68366 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA4AP68366 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA4AP68366 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
TUBA4AP68366 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.58■□□□□ 0.73
TUBA4AP68366 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA4AP68366 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.58■□□□□ 0.72
TUBA4AP68366 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.58■□□□□ 0.72
TUBA4AP68366 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.58■□□□□ 0.72
TUBA4AP68366 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA4AP68366 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA4AP68366 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA4AP68366 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TUBA4AP68366 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.58■□□□□ 0.72
TUBA4AP68366 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TUBA4AP68366 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.57■□□□□ 0.72
TUBA4AP68366 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.57■□□□□ 0.72
TUBA4AP68366 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.57■□□□□ 0.72
TUBA4AP68366 AC009086.3-201ENST00000623486 1008 ntBASIC19.57■□□□□ 0.72
TUBA4AP68366 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.57■□□□□ 0.72
TUBA4AP68366 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TUBA4AP68366 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TUBA4AP68366 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA4AP68366 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TUBA4AP68366 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TUBA4AP68366 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TUBA4AP68366 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBA4AP68366 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBA4AP68366 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBA4AP68366 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TUBA4AP68366 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.56■□□□□ 0.72
TUBA4AP68366 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 AL049796.1-201ENST00000565336 1766 ntBASIC19.56■□□□□ 0.72
TUBA4AP68366 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBA4AP68366 SMG8-203ENST00000578922 2178 ntBASIC19.56■□□□□ 0.72
TUBA4AP68366 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBA4AP68366 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
TUBA4AP68366 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 AC018445.3-201ENST00000624177 1945 ntBASIC19.55■□□□□ 0.72
TUBA4AP68366 AC073314.1-201ENST00000568729 2216 ntBASIC19.55■□□□□ 0.72
TUBA4AP68366 UNC93B3-201ENST00000308076 687 ntBASIC19.55■□□□□ 0.72
TUBA4AP68366 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.55■□□□□ 0.72
TUBA4AP68366 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TUBA4AP68366 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 AC104564.3-201ENST00000582367 638 ntBASIC19.55■□□□□ 0.72
TUBA4AP68366 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TUBA4AP68366 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.55■□□□□ 0.72
TUBA4AP68366 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.55■□□□□ 0.72
TUBA4AP68366 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TUBA4AP68366 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
TUBA4AP68366 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TUBA4AP68366 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
TUBA4AP68366 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.54■□□□□ 0.72
TUBA4AP68366 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.54■□□□□ 0.72
TUBA4AP68366 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.54■□□□□ 0.72
TUBA4AP68366 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 AC110285.6-201ENST00000617652 491 ntBASIC19.54■□□□□ 0.72
TUBA4AP68366 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TUBA4AP68366 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.54■□□□□ 0.72
TUBA4AP68366 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBA4AP68366 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBA4AP68366 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TUBA4AP68366 SYT6-210ENST00000641643 1587 ntBASIC19.53■□□□□ 0.72
TUBA4AP68366 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBA4AP68366 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBA4AP68366 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms