Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH12P55289 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.48■□□□□ 0.71
CDH12P55289 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 AC008406.3-201ENST00000620001 1374 ntBASIC19.47■□□□□ 0.71
CDH12P55289 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CDH12P55289 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH12P55289 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH12P55289 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH12P55289 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDH12P55289 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.47■□□□□ 0.71
CDH12P55289 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.47■□□□□ 0.71
CDH12P55289 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.47■□□□□ 0.71
CDH12P55289 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.47■□□□□ 0.71
CDH12P55289 AC133561.4-201ENST00000566112 224 ntBASIC19.47■□□□□ 0.71
CDH12P55289 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDH12P55289 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH12P55289 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH12P55289 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH12P55289 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDH12P55289 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH12P55289 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH12P55289 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH12P55289 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH12P55289 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDH12P55289 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH12P55289 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CDH12P55289 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH12P55289 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH12P55289 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.45■□□□□ 0.7
CDH12P55289 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 AC126544.1-201ENST00000580842 1059 ntBASIC19.45■□□□□ 0.7
CDH12P55289 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH12P55289 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDH12P55289 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CDH12P55289 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CDH12P55289 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH12P55289 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH12P55289 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH12P55289 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH12P55289 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH12P55289 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH12P55289 AC092667.1-201ENST00000434301 2586 ntBASIC19.44■□□□□ 0.7
CDH12P55289 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH12P55289 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH12P55289 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH12P55289 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH12P55289 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH12P55289 AC096631.2-201ENST00000436136 790 ntBASIC19.44■□□□□ 0.7
CDH12P55289 SMUG1P1-201ENST00000590640 811 ntBASIC19.44■□□□□ 0.7
CDH12P55289 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH12P55289 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH12P55289 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH12P55289 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH12P55289 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH12P55289 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CDH12P55289 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH12P55289 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CDH12P55289 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH12P55289 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH12P55289 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH12P55289 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms