Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 AC099778.1-201ENST00000568593 1911 ntBASIC21.05■□□□□ 0.96
LSP1P33241 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.05■□□□□ 0.96
LSP1P33241 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
LSP1P33241 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LSP1P33241 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSP1P33241 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.04■□□□□ 0.96
LSP1P33241 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.04■□□□□ 0.96
LSP1P33241 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.04■□□□□ 0.96
LSP1P33241 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LSP1P33241 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LSP1P33241 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LSP1P33241 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.04■□□□□ 0.96
LSP1P33241 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LSP1P33241 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSP1P33241 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSP1P33241 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LSP1P33241 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.03■□□□□ 0.96
LSP1P33241 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.03■□□□□ 0.96
LSP1P33241 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.03■□□□□ 0.96
LSP1P33241 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSP1P33241 AC007225.1-201ENST00000566331 1836 ntBASIC21.03■□□□□ 0.96
LSP1P33241 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSP1P33241 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.03■□□□□ 0.96
LSP1P33241 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSP1P33241 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSP1P33241 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LSP1P33241 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LSP1P33241 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LSP1P33241 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSP1P33241 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.02■□□□□ 0.96
LSP1P33241 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSP1P33241 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.02■□□□□ 0.96
LSP1P33241 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.02■□□□□ 0.96
LSP1P33241 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.02■□□□□ 0.96
LSP1P33241 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
LSP1P33241 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSP1P33241 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LSP1P33241 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
LSP1P33241 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.01■□□□□ 0.95
LSP1P33241 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSP1P33241 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.01■□□□□ 0.95
LSP1P33241 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.01■□□□□ 0.95
LSP1P33241 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.01■□□□□ 0.95
LSP1P33241 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LSP1P33241 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LSP1P33241 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.01■□□□□ 0.95
LSP1P33241 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSP1P33241 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSP1P33241 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.01■□□□□ 0.95
LSP1P33241 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSP1P33241 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21■□□□□ 0.95
LSP1P33241 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 AP000974.1-201ENST00000623909 2387 ntBASIC21■□□□□ 0.95
LSP1P33241 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LSP1P33241 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21■□□□□ 0.95
LSP1P33241 U85056.1-201ENST00000616429 682 ntBASIC21■□□□□ 0.95
LSP1P33241 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LSP1P33241 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21■□□□□ 0.95
LSP1P33241 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LSP1P33241 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
LSP1P33241 AC005703.6-201ENST00000623265 1329 ntBASIC21■□□□□ 0.95
LSP1P33241 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LSP1P33241 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21■□□□□ 0.95
LSP1P33241 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
LSP1P33241 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LSP1P33241 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LSP1P33241 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LSP1P33241 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.99■□□□□ 0.95
LSP1P33241 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LSP1P33241 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.99■□□□□ 0.95
LSP1P33241 AL031602.1-201ENST00000633169 911 ntBASIC20.99■□□□□ 0.95
LSP1P33241 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LSP1P33241 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms