Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
EPHA3P29320 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
EPHA3P29320 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA3P29320 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA3P29320 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA3P29320 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA3P29320 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA3P29320 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 SLC47A1P1-202ENST00000449666 945 ntBASIC20.36■□□□□ 0.85
EPHA3P29320 AP005435.1-201ENST00000529293 1178 ntBASIC20.36■□□□□ 0.85
EPHA3P29320 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.36■□□□□ 0.85
EPHA3P29320 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
EPHA3P29320 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.36■□□□□ 0.85
EPHA3P29320 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA3P29320 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA3P29320 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA3P29320 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA3P29320 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA3P29320 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA3P29320 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA3P29320 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
EPHA3P29320 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA3P29320 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA3P29320 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA3P29320 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
EPHA3P29320 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA3P29320 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA3P29320 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA3P29320 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.34■□□□□ 0.85
EPHA3P29320 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
EPHA3P29320 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA3P29320 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA3P29320 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.34■□□□□ 0.85
EPHA3P29320 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.34■□□□□ 0.85
EPHA3P29320 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.34■□□□□ 0.85
EPHA3P29320 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA3P29320 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
EPHA3P29320 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA3P29320 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
EPHA3P29320 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.34■□□□□ 0.85
EPHA3P29320 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA3P29320 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA3P29320 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.34■□□□□ 0.85
EPHA3P29320 SYT6-210ENST00000641643 1587 ntBASIC20.34■□□□□ 0.85
EPHA3P29320 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA3P29320 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.33■□□□□ 0.85
EPHA3P29320 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.33■□□□□ 0.85
EPHA3P29320 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
EPHA3P29320 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA3P29320 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA3P29320 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA3P29320 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA3P29320 AL138724.1-201ENST00000606771 1088 ntBASIC20.33■□□□□ 0.85
EPHA3P29320 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
EPHA3P29320 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA3P29320 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
EPHA3P29320 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA3P29320 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA3P29320 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA3P29320 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA3P29320 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
EPHA3P29320 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
EPHA3P29320 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA3P29320 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA3P29320 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA3P29320 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA3P29320 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA3P29320 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA3P29320 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA3P29320 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA3P29320 AC136469.2-201ENST00000623944 1028 ntBASIC20.32■□□□□ 0.84
EPHA3P29320 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
EPHA3P29320 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA3P29320 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
EPHA3P29320 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.32■□□□□ 0.84
EPHA3P29320 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA3P29320 AC007952.6-201ENST00000573168 2673 ntBASIC20.31■□□□□ 0.84
EPHA3P29320 AC003957.1-201ENST00000625108 2673 ntBASIC20.31■□□□□ 0.84
EPHA3P29320 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHA3P29320 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
EPHA3P29320 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 AFG3L1P-217ENST00000557444 2447 ntBASIC20.31■□□□□ 0.84
EPHA3P29320 GUSBP5-201ENST00000418136 578 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms