Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV20-1A0A075B6N2 AC020763.4-201ENST00000623414 4170 ntBASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV20-1A0A075B6N2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 MIR219A2-201ENST00000608502 1504 ntBASIC14□□□□□ -0.17
TRBV20-1A0A075B6N2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 NEFHP1-201ENST00000412845 2629 ntBASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC13.99□□□□□ -0.17
TRBV20-1A0A075B6N2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms