Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB1Q9Y5G3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDHGB1Q9Y5G3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB1Q9Y5G3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PCDHGB1Q9Y5G3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGB1Q9Y5G3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB1Q9Y5G3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHGB1Q9Y5G3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDHGB1Q9Y5G3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
PCDHGB1Q9Y5G3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGB1Q9Y5G3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGB1Q9Y5G3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PCDHGB1Q9Y5G3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHGB1Q9Y5G3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDHGB1Q9Y5G3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PCDHGB1Q9Y5G3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGB1Q9Y5G3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGB1Q9Y5G3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGB1Q9Y5G3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGB1Q9Y5G3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGB1Q9Y5G3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB1Q9Y5G3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB1Q9Y5G3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB1Q9Y5G3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PCDHGB1Q9Y5G3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
PCDHGB1Q9Y5G3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGB1Q9Y5G3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB1Q9Y5G3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHGB1Q9Y5G3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB1Q9Y5G3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB1Q9Y5G3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PCDHGB1Q9Y5G3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGB1Q9Y5G3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGB1Q9Y5G3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHGB1Q9Y5G3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGB1Q9Y5G3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDHGB1Q9Y5G3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDHGB1Q9Y5G3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB1Q9Y5G3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB1Q9Y5G3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB1Q9Y5G3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
PCDHGB1Q9Y5G3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB1Q9Y5G3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGB1Q9Y5G3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGB1Q9Y5G3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGB1Q9Y5G3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGB1Q9Y5G3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGB1Q9Y5G3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGB1Q9Y5G3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGB1Q9Y5G3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGB1Q9Y5G3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB1Q9Y5G3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB1Q9Y5G3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB1Q9Y5G3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB1Q9Y5G3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGB1Q9Y5G3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB1Q9Y5G3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.16■■□□□ 1.46
PCDHGB1Q9Y5G3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHGB1Q9Y5G3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB1Q9Y5G3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB1Q9Y5G3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHGB1Q9Y5G3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
PCDHGB1Q9Y5G3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB1Q9Y5G3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB1Q9Y5G3 AL121749.1-202ENST00000609313 2153 ntBASIC24.15■■□□□ 1.46
PCDHGB1Q9Y5G3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB1Q9Y5G3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB1Q9Y5G3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB1Q9Y5G3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB1Q9Y5G3 AP002365.1-201ENST00000603448 772 ntBASIC24.12■■□□□ 1.45
PCDHGB1Q9Y5G3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGB1Q9Y5G3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGB1Q9Y5G3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB1Q9Y5G3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB1Q9Y5G3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDHGB1Q9Y5G3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGB1Q9Y5G3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGB1Q9Y5G3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB1Q9Y5G3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB1Q9Y5G3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDHGB1Q9Y5G3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGB1Q9Y5G3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PCDHGB1Q9Y5G3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGB1Q9Y5G3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGB1Q9Y5G3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGB1Q9Y5G3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGB1Q9Y5G3 AC135731.1-201ENST00000569415 2548 ntBASIC24.06■■□□□ 1.44
PCDHGB1Q9Y5G3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB1Q9Y5G3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
PCDHGB1Q9Y5G3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGB1Q9Y5G3 AL135925.1-201ENST00000605920 1701 ntBASIC24.04■■□□□ 1.44
PCDHGB1Q9Y5G3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGB1Q9Y5G3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGB1Q9Y5G3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
PCDHGB1Q9Y5G3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB1Q9Y5G3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGB1Q9Y5G3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGB1Q9Y5G3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHGB1Q9Y5G3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGB1Q9Y5G3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms