Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRDL1Q9BU40 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRDL1Q9BU40 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRDL1Q9BU40 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRDL1Q9BU40 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRDL1Q9BU40 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRDL1Q9BU40 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRDL1Q9BU40 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRDL1Q9BU40 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRDL1Q9BU40 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHRDL1Q9BU40 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRDL1Q9BU40 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRDL1Q9BU40 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRDL1Q9BU40 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRDL1Q9BU40 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHRDL1Q9BU40 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRDL1Q9BU40 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRDL1Q9BU40 SETD8P1-201ENST00000623146 1180 ntBASIC20.83■□□□□ 0.93
CHRDL1Q9BU40 WASH5P-204ENST00000632292 975 ntBASIC20.83■□□□□ 0.93
CHRDL1Q9BU40 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRDL1Q9BU40 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRDL1Q9BU40 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRDL1Q9BU40 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRDL1Q9BU40 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRDL1Q9BU40 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHRDL1Q9BU40 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRDL1Q9BU40 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRDL1Q9BU40 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHRDL1Q9BU40 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRDL1Q9BU40 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRDL1Q9BU40 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHRDL1Q9BU40 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRDL1Q9BU40 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRDL1Q9BU40 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRDL1Q9BU40 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRDL1Q9BU40 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRDL1Q9BU40 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.76■□□□□ 0.91
CHRDL1Q9BU40 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRDL1Q9BU40 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRDL1Q9BU40 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHRDL1Q9BU40 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRDL1Q9BU40 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHRDL1Q9BU40 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRDL1Q9BU40 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHRDL1Q9BU40 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRDL1Q9BU40 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHRDL1Q9BU40 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRDL1Q9BU40 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRDL1Q9BU40 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRDL1Q9BU40 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRDL1Q9BU40 AC139426.1-201ENST00000568218 2529 ntBASIC20.7■□□□□ 0.9
CHRDL1Q9BU40 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CHRDL1Q9BU40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRDL1Q9BU40 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.69■□□□□ 0.9
CHRDL1Q9BU40 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRDL1Q9BU40 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRDL1Q9BU40 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHRDL1Q9BU40 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRDL1Q9BU40 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRDL1Q9BU40 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRDL1Q9BU40 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRDL1Q9BU40 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRDL1Q9BU40 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRDL1Q9BU40 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRDL1Q9BU40 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDL1Q9BU40 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDL1Q9BU40 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDL1Q9BU40 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRDL1Q9BU40 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDL1Q9BU40 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDL1Q9BU40 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CHRDL1Q9BU40 AC136428.2-201ENST00000563187 214 ntBASIC20.64■□□□□ 0.89
CHRDL1Q9BU40 AC097358.2-201ENST00000607541 1159 ntBASIC20.64■□□□□ 0.89
CHRDL1Q9BU40 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRDL1Q9BU40 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDL1Q9BU40 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDL1Q9BU40 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDL1Q9BU40 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRDL1Q9BU40 ST7-AS1-201ENST00000456775 1889 ntBASIC20.62■□□□□ 0.89
CHRDL1Q9BU40 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.62■□□□□ 0.89
CHRDL1Q9BU40 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHRDL1Q9BU40 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDL1Q9BU40 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDL1Q9BU40 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDL1Q9BU40 AL391121.1-201ENST00000607967 1349 ntBASIC20.6■□□□□ 0.89
CHRDL1Q9BU40 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRDL1Q9BU40 AL135925.1-201ENST00000605920 1701 ntBASIC20.59■□□□□ 0.89
CHRDL1Q9BU40 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRDL1Q9BU40 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRDL1Q9BU40 CAHM-201ENST00000604200 896 ntBASIC20.59■□□□□ 0.89
CHRDL1Q9BU40 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRDL1Q9BU40 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRDL1Q9BU40 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHRDL1Q9BU40 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms