Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RPS2P35-201ENST00000443417 897 ntBASIC31.51■■■□□ 2.63
ZKSCAN3Q9BRR0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.51■■■□□ 2.63
ZKSCAN3Q9BRR0 AC005559.1-201ENST00000589661 871 ntBASIC31.5■■■□□ 2.63
ZKSCAN3Q9BRR0 DUX4L28-201ENST00000623687 678 ntBASIC31.5■■■□□ 2.63
ZKSCAN3Q9BRR0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ZKSCAN3Q9BRR0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ZKSCAN3Q9BRR0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZKSCAN3Q9BRR0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ZKSCAN3Q9BRR0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.49■■■□□ 2.63
ZKSCAN3Q9BRR0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZKSCAN3Q9BRR0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZKSCAN3Q9BRR0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.47■■■□□ 2.63
ZKSCAN3Q9BRR0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZKSCAN3Q9BRR0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ZKSCAN3Q9BRR0 AP006261.1-201ENST00000584783 668 ntBASIC31.47■■■□□ 2.63
ZKSCAN3Q9BRR0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.46■■■□□ 2.63
ZKSCAN3Q9BRR0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.46■■■□□ 2.63
ZKSCAN3Q9BRR0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ZKSCAN3Q9BRR0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ZKSCAN3Q9BRR0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ZKSCAN3Q9BRR0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ZKSCAN3Q9BRR0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ZKSCAN3Q9BRR0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZKSCAN3Q9BRR0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ZKSCAN3Q9BRR0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.43■■■□□ 2.62
ZKSCAN3Q9BRR0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.43■■■□□ 2.62
ZKSCAN3Q9BRR0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ZKSCAN3Q9BRR0 MIR3665-201ENST00000578708 105 ntBASIC31.41■■■□□ 2.62
ZKSCAN3Q9BRR0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZKSCAN3Q9BRR0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.4■■■□□ 2.62
ZKSCAN3Q9BRR0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
ZKSCAN3Q9BRR0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZKSCAN3Q9BRR0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.38■■■□□ 2.61
ZKSCAN3Q9BRR0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN3Q9BRR0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN3Q9BRR0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN3Q9BRR0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZKSCAN3Q9BRR0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
ZKSCAN3Q9BRR0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.34■■■□□ 2.61
ZKSCAN3Q9BRR0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.33■■■□□ 2.61
ZKSCAN3Q9BRR0 AC087741.3-201ENST00000624270 1347 ntBASIC31.32■■■□□ 2.6
ZKSCAN3Q9BRR0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
ZKSCAN3Q9BRR0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ZKSCAN3Q9BRR0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.31■■■□□ 2.6
ZKSCAN3Q9BRR0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
ZKSCAN3Q9BRR0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
ZKSCAN3Q9BRR0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN3Q9BRR0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN3Q9BRR0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN3Q9BRR0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.27■■■□□ 2.6
ZKSCAN3Q9BRR0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZKSCAN3Q9BRR0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
ZKSCAN3Q9BRR0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ZKSCAN3Q9BRR0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZKSCAN3Q9BRR0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.25■■■□□ 2.59
ZKSCAN3Q9BRR0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.25■■■□□ 2.59
ZKSCAN3Q9BRR0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ZKSCAN3Q9BRR0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.24■■■□□ 2.59
ZKSCAN3Q9BRR0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN3Q9BRR0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZKSCAN3Q9BRR0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.24■■■□□ 2.59
ZKSCAN3Q9BRR0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
ZKSCAN3Q9BRR0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
ZKSCAN3Q9BRR0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZKSCAN3Q9BRR0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZKSCAN3Q9BRR0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZKSCAN3Q9BRR0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZKSCAN3Q9BRR0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZKSCAN3Q9BRR0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.2■■■□□ 2.59
ZKSCAN3Q9BRR0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.19■■■□□ 2.58
ZKSCAN3Q9BRR0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZKSCAN3Q9BRR0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
ZKSCAN3Q9BRR0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ZKSCAN3Q9BRR0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZKSCAN3Q9BRR0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZKSCAN3Q9BRR0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.15■■■□□ 2.58
ZKSCAN3Q9BRR0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZKSCAN3Q9BRR0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.15■■■□□ 2.58
ZKSCAN3Q9BRR0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZKSCAN3Q9BRR0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ZKSCAN3Q9BRR0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ZKSCAN3Q9BRR0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ZKSCAN3Q9BRR0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ZKSCAN3Q9BRR0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ZKSCAN3Q9BRR0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
ZKSCAN3Q9BRR0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
ZKSCAN3Q9BRR0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.12■■■□□ 2.57
ZKSCAN3Q9BRR0 AC044849.2-201ENST00000606596 710 ntBASIC31.12■■■□□ 2.57
ZKSCAN3Q9BRR0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ZKSCAN3Q9BRR0 AL135925.1-201ENST00000605920 1701 ntBASIC31.11■■■□□ 2.57
ZKSCAN3Q9BRR0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ZKSCAN3Q9BRR0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.09■■■□□ 2.57
ZKSCAN3Q9BRR0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ZKSCAN3Q9BRR0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms