Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMCN1Q96RW7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMCN1Q96RW7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HMCN1Q96RW7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HMCN1Q96RW7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
HMCN1Q96RW7 RARRES2P1-201ENST00000474487 481 ntBASIC8.62□□□□□ -1.03
HMCN1Q96RW7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HMCN1Q96RW7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC8.62□□□□□ -1.03
HMCN1Q96RW7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 AC008813.1-201ENST00000536597 885 ntBASIC8.61□□□□□ -1.03
HMCN1Q96RW7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC8.61□□□□□ -1.03
HMCN1Q96RW7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
HMCN1Q96RW7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HMCN1Q96RW7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC8.6□□□□□ -1.03
HMCN1Q96RW7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
HMCN1Q96RW7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HMCN1Q96RW7 AL451085.2-201ENST00000605085 799 ntBASIC8.6□□□□□ -1.03
HMCN1Q96RW7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 GPX1-201ENST00000419349 1106 ntBASIC8.59□□□□□ -1.03
HMCN1Q96RW7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC8.59□□□□□ -1.03
HMCN1Q96RW7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC8.58□□□□□ -1.04
HMCN1Q96RW7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMCN1Q96RW7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMCN1Q96RW7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HMCN1Q96RW7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L13-201ENST00000554103 1267 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L15-201ENST00000611059 1267 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L23-201ENST00000615195 1269 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L24-201ENST00000617576 1269 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L22-201ENST00000618238 1269 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L20-201ENST00000619712 1269 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L21-201ENST00000622058 1269 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L10-201ENST00000622460 1267 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 DUX4L25-201ENST00000624915 1269 ntBASIC8.58□□□□□ -1.04
HMCN1Q96RW7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
HMCN1Q96RW7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMCN1Q96RW7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC8.57□□□□□ -1.04
HMCN1Q96RW7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC8.57□□□□□ -1.04
HMCN1Q96RW7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 GFER-205ENST00000569451 517 ntTSL 5 BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HMCN1Q96RW7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC8.55□□□□□ -1.04
HMCN1Q96RW7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC8.55□□□□□ -1.04
HMCN1Q96RW7 TSPY13P-201ENST00000338964 914 ntBASIC8.55□□□□□ -1.04
HMCN1Q96RW7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HMCN1Q96RW7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 MIR6090-201ENST00000622481 60 ntBASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HMCN1Q96RW7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HMCN1Q96RW7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
HMCN1Q96RW7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
HMCN1Q96RW7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HMCN1Q96RW7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HMCN1Q96RW7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HMCN1Q96RW7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC8.52□□□□□ -1.05
HMCN1Q96RW7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC8.52□□□□□ -1.05
HMCN1Q96RW7 HES6-205ENST00000409356 528 ntTSL 2 BASIC8.52□□□□□ -1.05
HMCN1Q96RW7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
HMCN1Q96RW7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HMCN1Q96RW7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMCN1Q96RW7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC8.5□□□□□ -1.05
HMCN1Q96RW7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMCN1Q96RW7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
HMCN1Q96RW7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
HMCN1Q96RW7 AC004987.1-201ENST00000428627 508 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms