Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ARHGEF39Q8N4T4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ARHGEF39Q8N4T4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ARHGEF39Q8N4T4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARHGEF39Q8N4T4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARHGEF39Q8N4T4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF39Q8N4T4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF39Q8N4T4 AC087741.3-201ENST00000624270 1347 ntBASIC25.37■■□□□ 1.65
ARHGEF39Q8N4T4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF39Q8N4T4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ARHGEF39Q8N4T4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF39Q8N4T4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ARHGEF39Q8N4T4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.33■■□□□ 1.65
ARHGEF39Q8N4T4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ARHGEF39Q8N4T4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF39Q8N4T4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
ARHGEF39Q8N4T4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF39Q8N4T4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF39Q8N4T4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
ARHGEF39Q8N4T4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.26■■□□□ 1.63
ARHGEF39Q8N4T4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.24■■□□□ 1.63
ARHGEF39Q8N4T4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.24■■□□□ 1.63
ARHGEF39Q8N4T4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
ARHGEF39Q8N4T4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF39Q8N4T4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF39Q8N4T4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF39Q8N4T4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF39Q8N4T4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.19■■□□□ 1.62
ARHGEF39Q8N4T4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.19■■□□□ 1.62
ARHGEF39Q8N4T4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 AC044849.2-201ENST00000606596 710 ntBASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.17■■□□□ 1.62
ARHGEF39Q8N4T4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ARHGEF39Q8N4T4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF39Q8N4T4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF39Q8N4T4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF39Q8N4T4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ARHGEF39Q8N4T4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ARHGEF39Q8N4T4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF39Q8N4T4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
ARHGEF39Q8N4T4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.13■■□□□ 1.61
ARHGEF39Q8N4T4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.13■■□□□ 1.61
ARHGEF39Q8N4T4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF39Q8N4T4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF39Q8N4T4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF39Q8N4T4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 MIR6090-201ENST00000622481 60 ntBASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 AL135925.1-201ENST00000605920 1701 ntBASIC25.06■■□□□ 1.6
ARHGEF39Q8N4T4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF39Q8N4T4 AC010864.1-201ENST00000609407 1511 ntBASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms