Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAPTM4BQ86VI4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAPTM4BQ86VI4 AC087741.3-201ENST00000624270 1347 ntBASIC25.32■■□□□ 1.64
LAPTM4BQ86VI4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.31■■□□□ 1.64
LAPTM4BQ86VI4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LAPTM4BQ86VI4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LAPTM4BQ86VI4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.29■■□□□ 1.64
LAPTM4BQ86VI4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LAPTM4BQ86VI4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LAPTM4BQ86VI4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
LAPTM4BQ86VI4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.29■■□□□ 1.64
LAPTM4BQ86VI4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.28■■□□□ 1.64
LAPTM4BQ86VI4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LAPTM4BQ86VI4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LAPTM4BQ86VI4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LAPTM4BQ86VI4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LAPTM4BQ86VI4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LAPTM4BQ86VI4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
LAPTM4BQ86VI4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
LAPTM4BQ86VI4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LAPTM4BQ86VI4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LAPTM4BQ86VI4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LAPTM4BQ86VI4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.23■■□□□ 1.63
LAPTM4BQ86VI4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.23■■□□□ 1.63
LAPTM4BQ86VI4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.23■■□□□ 1.63
LAPTM4BQ86VI4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LAPTM4BQ86VI4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LAPTM4BQ86VI4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
LAPTM4BQ86VI4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
LAPTM4BQ86VI4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
LAPTM4BQ86VI4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LAPTM4BQ86VI4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LAPTM4BQ86VI4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
LAPTM4BQ86VI4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
LAPTM4BQ86VI4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
LAPTM4BQ86VI4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LAPTM4BQ86VI4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.16■■□□□ 1.62
LAPTM4BQ86VI4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.16■■□□□ 1.62
LAPTM4BQ86VI4 AC044849.2-201ENST00000606596 710 ntBASIC25.16■■□□□ 1.62
LAPTM4BQ86VI4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LAPTM4BQ86VI4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LAPTM4BQ86VI4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LAPTM4BQ86VI4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LAPTM4BQ86VI4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LAPTM4BQ86VI4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LAPTM4BQ86VI4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
LAPTM4BQ86VI4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.12■■□□□ 1.61
LAPTM4BQ86VI4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LAPTM4BQ86VI4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
LAPTM4BQ86VI4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.12■■□□□ 1.61
LAPTM4BQ86VI4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LAPTM4BQ86VI4 AL161658.1-201ENST00000623641 1967 ntBASIC25.11■■□□□ 1.61
LAPTM4BQ86VI4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LAPTM4BQ86VI4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.11■■□□□ 1.61
LAPTM4BQ86VI4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
LAPTM4BQ86VI4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.1■■□□□ 1.61
LAPTM4BQ86VI4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LAPTM4BQ86VI4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LAPTM4BQ86VI4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LAPTM4BQ86VI4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.08■■□□□ 1.61
LAPTM4BQ86VI4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
LAPTM4BQ86VI4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LAPTM4BQ86VI4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LAPTM4BQ86VI4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LAPTM4BQ86VI4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LAPTM4BQ86VI4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LAPTM4BQ86VI4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LAPTM4BQ86VI4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.05■■□□□ 1.6
LAPTM4BQ86VI4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LAPTM4BQ86VI4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LAPTM4BQ86VI4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LAPTM4BQ86VI4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LAPTM4BQ86VI4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LAPTM4BQ86VI4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LAPTM4BQ86VI4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
LAPTM4BQ86VI4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LAPTM4BQ86VI4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LAPTM4BQ86VI4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.03■■□□□ 1.6
LAPTM4BQ86VI4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.03■■□□□ 1.6
LAPTM4BQ86VI4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.02■■□□□ 1.6
LAPTM4BQ86VI4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LAPTM4BQ86VI4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.01■■□□□ 1.59
LAPTM4BQ86VI4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LAPTM4BQ86VI4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25■■□□□ 1.59
LAPTM4BQ86VI4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LAPTM4BQ86VI4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LAPTM4BQ86VI4 ABHD17AP4-201ENST00000411545 909 ntBASIC24.99■■□□□ 1.59
LAPTM4BQ86VI4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
LAPTM4BQ86VI4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LAPTM4BQ86VI4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LAPTM4BQ86VI4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.98■■□□□ 1.59
LAPTM4BQ86VI4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
LAPTM4BQ86VI4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LAPTM4BQ86VI4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.97■■□□□ 1.59
LAPTM4BQ86VI4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.97■■□□□ 1.59
LAPTM4BQ86VI4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LAPTM4BQ86VI4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
LAPTM4BQ86VI4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
LAPTM4BQ86VI4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.96■■□□□ 1.59
LAPTM4BQ86VI4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms