Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CROCCP2Q86T23 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CROCCP2Q86T23 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CROCCP2Q86T23 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CROCCP2Q86T23 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CROCCP2Q86T23 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.1■■□□□ 1.93
CROCCP2Q86T23 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CROCCP2Q86T23 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CROCCP2Q86T23 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CROCCP2Q86T23 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
CROCCP2Q86T23 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CROCCP2Q86T23 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CROCCP2Q86T23 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CROCCP2Q86T23 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CROCCP2Q86T23 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.08■■□□□ 1.93
CROCCP2Q86T23 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CROCCP2Q86T23 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CROCCP2Q86T23 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CROCCP2Q86T23 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
CROCCP2Q86T23 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CROCCP2Q86T23 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CROCCP2Q86T23 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CROCCP2Q86T23 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.05■■□□□ 1.92
CROCCP2Q86T23 AL135925.1-201ENST00000605920 1701 ntBASIC27.05■■□□□ 1.92
CROCCP2Q86T23 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.05■■□□□ 1.92
CROCCP2Q86T23 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
CROCCP2Q86T23 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
CROCCP2Q86T23 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
CROCCP2Q86T23 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CROCCP2Q86T23 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CROCCP2Q86T23 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CROCCP2Q86T23 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CROCCP2Q86T23 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27■■□□□ 1.91
CROCCP2Q86T23 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CROCCP2Q86T23 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CROCCP2Q86T23 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CROCCP2Q86T23 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.98■■□□□ 1.91
CROCCP2Q86T23 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CROCCP2Q86T23 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CROCCP2Q86T23 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.97■■□□□ 1.91
CROCCP2Q86T23 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CROCCP2Q86T23 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CROCCP2Q86T23 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CROCCP2Q86T23 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
CROCCP2Q86T23 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CROCCP2Q86T23 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
CROCCP2Q86T23 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.95■■□□□ 1.9
CROCCP2Q86T23 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
CROCCP2Q86T23 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CROCCP2Q86T23 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CROCCP2Q86T23 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CROCCP2Q86T23 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CROCCP2Q86T23 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CROCCP2Q86T23 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CROCCP2Q86T23 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CROCCP2Q86T23 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CROCCP2Q86T23 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CROCCP2Q86T23 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
CROCCP2Q86T23 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CROCCP2Q86T23 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.88■■□□□ 1.89
CROCCP2Q86T23 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CROCCP2Q86T23 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CROCCP2Q86T23 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CROCCP2Q86T23 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CROCCP2Q86T23 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CROCCP2Q86T23 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
CROCCP2Q86T23 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.86■■□□□ 1.89
CROCCP2Q86T23 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CROCCP2Q86T23 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
CROCCP2Q86T23 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CROCCP2Q86T23 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CROCCP2Q86T23 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CROCCP2Q86T23 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.84■■□□□ 1.89
CROCCP2Q86T23 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CROCCP2Q86T23 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CROCCP2Q86T23 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CROCCP2Q86T23 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CROCCP2Q86T23 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CROCCP2Q86T23 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.8■■□□□ 1.88
CROCCP2Q86T23 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CROCCP2Q86T23 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CROCCP2Q86T23 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CROCCP2Q86T23 AL139393.2-201ENST00000608721 2025 ntBASIC26.78■■□□□ 1.88
CROCCP2Q86T23 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CROCCP2Q86T23 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CROCCP2Q86T23 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CROCCP2Q86T23 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
CROCCP2Q86T23 DRD5P2-201ENST00000421395 2012 ntBASIC26.75■■□□□ 1.87
CROCCP2Q86T23 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CROCCP2Q86T23 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CROCCP2Q86T23 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CROCCP2Q86T23 AL121749.1-202ENST00000609313 2153 ntBASIC26.74■■□□□ 1.87
CROCCP2Q86T23 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CROCCP2Q86T23 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CROCCP2Q86T23 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.73■■□□□ 1.87
CROCCP2Q86T23 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CROCCP2Q86T23 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CROCCP2Q86T23 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
CROCCP2Q86T23 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CROCCP2Q86T23 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms