Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VMA21Q3ZAQ7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
VMA21Q3ZAQ7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VMA21Q3ZAQ7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VMA21Q3ZAQ7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
VMA21Q3ZAQ7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VMA21Q3ZAQ7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VMA21Q3ZAQ7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VMA21Q3ZAQ7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VMA21Q3ZAQ7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VMA21Q3ZAQ7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.37■■□□□ 1.01
VMA21Q3ZAQ7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VMA21Q3ZAQ7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VMA21Q3ZAQ7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VMA21Q3ZAQ7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VMA21Q3ZAQ7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VMA21Q3ZAQ7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VMA21Q3ZAQ7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
VMA21Q3ZAQ7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.34■■□□□ 1.01
VMA21Q3ZAQ7 ST7-AS1-201ENST00000456775 1889 ntBASIC21.34■■□□□ 1.01
VMA21Q3ZAQ7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.33■■□□□ 1.01
VMA21Q3ZAQ7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VMA21Q3ZAQ7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
VMA21Q3ZAQ7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VMA21Q3ZAQ7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VMA21Q3ZAQ7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VMA21Q3ZAQ7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.32■■□□□ 1
VMA21Q3ZAQ7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VMA21Q3ZAQ7 AL135925.1-201ENST00000605920 1701 ntBASIC21.32■■□□□ 1
VMA21Q3ZAQ7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.31■■□□□ 1
VMA21Q3ZAQ7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.31■■□□□ 1
VMA21Q3ZAQ7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VMA21Q3ZAQ7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VMA21Q3ZAQ7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VMA21Q3ZAQ7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VMA21Q3ZAQ7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.29■■□□□ 1
VMA21Q3ZAQ7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VMA21Q3ZAQ7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.29■■□□□ 1
VMA21Q3ZAQ7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.28■■□□□ 1
VMA21Q3ZAQ7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VMA21Q3ZAQ7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VMA21Q3ZAQ7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VMA21Q3ZAQ7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VMA21Q3ZAQ7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VMA21Q3ZAQ7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VMA21Q3ZAQ7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.27■■□□□ 1
VMA21Q3ZAQ7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.27■■□□□ 1
VMA21Q3ZAQ7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.26■□□□□ 0.99
VMA21Q3ZAQ7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VMA21Q3ZAQ7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
VMA21Q3ZAQ7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VMA21Q3ZAQ7 ABCB10P3-201ENST00000561950 2166 ntBASIC21.26■□□□□ 0.99
VMA21Q3ZAQ7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VMA21Q3ZAQ7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VMA21Q3ZAQ7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VMA21Q3ZAQ7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.25■□□□□ 0.99
VMA21Q3ZAQ7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.24■□□□□ 0.99
VMA21Q3ZAQ7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VMA21Q3ZAQ7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VMA21Q3ZAQ7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VMA21Q3ZAQ7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
VMA21Q3ZAQ7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
VMA21Q3ZAQ7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VMA21Q3ZAQ7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VMA21Q3ZAQ7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VMA21Q3ZAQ7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VMA21Q3ZAQ7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VMA21Q3ZAQ7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VMA21Q3ZAQ7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VMA21Q3ZAQ7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.2■□□□□ 0.98
VMA21Q3ZAQ7 AC097358.2-201ENST00000607541 1159 ntBASIC21.2■□□□□ 0.98
VMA21Q3ZAQ7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VMA21Q3ZAQ7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
VMA21Q3ZAQ7 AL391121.1-201ENST00000607967 1349 ntBASIC21.19■□□□□ 0.98
VMA21Q3ZAQ7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VMA21Q3ZAQ7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VMA21Q3ZAQ7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VMA21Q3ZAQ7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VMA21Q3ZAQ7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VMA21Q3ZAQ7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VMA21Q3ZAQ7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VMA21Q3ZAQ7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VMA21Q3ZAQ7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VMA21Q3ZAQ7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VMA21Q3ZAQ7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VMA21Q3ZAQ7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VMA21Q3ZAQ7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.15■□□□□ 0.98
VMA21Q3ZAQ7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
VMA21Q3ZAQ7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VMA21Q3ZAQ7 AC136428.2-201ENST00000563187 214 ntBASIC21.14■□□□□ 0.97
VMA21Q3ZAQ7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VMA21Q3ZAQ7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VMA21Q3ZAQ7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VMA21Q3ZAQ7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.13■□□□□ 0.97
VMA21Q3ZAQ7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.13■□□□□ 0.97
VMA21Q3ZAQ7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VMA21Q3ZAQ7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VMA21Q3ZAQ7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VMA21Q3ZAQ7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VMA21Q3ZAQ7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms