Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.76■■■□□ 2.84
PDE1AP54750 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PDE1AP54750 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.75■■■□□ 2.83
PDE1AP54750 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
PDE1AP54750 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.75■■■□□ 2.83
PDE1AP54750 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.74■■■□□ 2.83
PDE1AP54750 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PDE1AP54750 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PDE1AP54750 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.71■■■□□ 2.83
PDE1AP54750 ST7-AS1-201ENST00000456775 1889 ntBASIC32.71■■■□□ 2.83
PDE1AP54750 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.7■■■□□ 2.83
PDE1AP54750 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PDE1AP54750 AL135925.1-201ENST00000605920 1701 ntBASIC32.68■■■□□ 2.82
PDE1AP54750 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PDE1AP54750 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
PDE1AP54750 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PDE1AP54750 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.68■■■□□ 2.82
PDE1AP54750 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PDE1AP54750 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PDE1AP54750 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PDE1AP54750 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
PDE1AP54750 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PDE1AP54750 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PDE1AP54750 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PDE1AP54750 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PDE1AP54750 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
PDE1AP54750 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.64■■■□□ 2.82
PDE1AP54750 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.81
PDE1AP54750 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PDE1AP54750 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
PDE1AP54750 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
PDE1AP54750 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PDE1AP54750 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PDE1AP54750 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
PDE1AP54750 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.6■■■□□ 2.81
PDE1AP54750 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
PDE1AP54750 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.59■■■□□ 2.81
PDE1AP54750 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
PDE1AP54750 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PDE1AP54750 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
PDE1AP54750 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.57■■■□□ 2.8
PDE1AP54750 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
PDE1AP54750 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
PDE1AP54750 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PDE1AP54750 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.56■■■□□ 2.8
PDE1AP54750 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
PDE1AP54750 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PDE1AP54750 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDE1AP54750 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDE1AP54750 SUZ12P1-203ENST00000578195 985 ntBASIC32.54■■■□□ 2.8
PDE1AP54750 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PDE1AP54750 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PDE1AP54750 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PDE1AP54750 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.52■■■□□ 2.8
PDE1AP54750 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
PDE1AP54750 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
PDE1AP54750 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
PDE1AP54750 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PDE1AP54750 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.51■■■□□ 2.79
PDE1AP54750 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PDE1AP54750 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
PDE1AP54750 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PDE1AP54750 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
PDE1AP54750 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
PDE1AP54750 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PDE1AP54750 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.49■■■□□ 2.79
PDE1AP54750 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PDE1AP54750 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.48■■■□□ 2.79
PDE1AP54750 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PDE1AP54750 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PDE1AP54750 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
PDE1AP54750 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
PDE1AP54750 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.47■■■□□ 2.79
PDE1AP54750 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PDE1AP54750 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PDE1AP54750 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PDE1AP54750 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PDE1AP54750 ABCB10P3-201ENST00000561950 2166 ntBASIC32.45■■■□□ 2.78
PDE1AP54750 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
PDE1AP54750 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
PDE1AP54750 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
PDE1AP54750 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PDE1AP54750 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.42■■■□□ 2.78
PDE1AP54750 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PDE1AP54750 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.41■■■□□ 2.78
PDE1AP54750 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PDE1AP54750 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PDE1AP54750 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PDE1AP54750 AC010864.1-201ENST00000609407 1511 ntBASIC32.38■■■□□ 2.77
PDE1AP54750 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PDE1AP54750 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.37■■■□□ 2.77
PDE1AP54750 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
PDE1AP54750 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.36■■■□□ 2.77
PDE1AP54750 MIR762-201ENST00000390236 83 ntBASIC32.35■■■□□ 2.77
PDE1AP54750 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
PDE1AP54750 AC139426.1-201ENST00000568218 2529 ntBASIC32.34■■■□□ 2.77
PDE1AP54750 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PDE1AP54750 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
PDE1AP54750 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PDE1AP54750 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms