Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CYP3A4P08684 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CYP3A4P08684 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CYP3A4P08684 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CYP3A4P08684 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CYP3A4P08684 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CYP3A4P08684 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.34■■■□□ 2.45
CYP3A4P08684 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CYP3A4P08684 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CYP3A4P08684 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.33■■■□□ 2.45
CYP3A4P08684 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CYP3A4P08684 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CYP3A4P08684 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.31■■■□□ 2.44
CYP3A4P08684 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
CYP3A4P08684 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.3■■■□□ 2.44
CYP3A4P08684 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CYP3A4P08684 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CYP3A4P08684 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CYP3A4P08684 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.27■■■□□ 2.44
CYP3A4P08684 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.27■■■□□ 2.44
CYP3A4P08684 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CYP3A4P08684 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.26■■■□□ 2.44
CYP3A4P08684 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CYP3A4P08684 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CYP3A4P08684 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
CYP3A4P08684 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CYP3A4P08684 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CYP3A4P08684 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.24■■■□□ 2.43
CYP3A4P08684 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CYP3A4P08684 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.22■■■□□ 2.43
CYP3A4P08684 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.22■■■□□ 2.43
CYP3A4P08684 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CYP3A4P08684 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CYP3A4P08684 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CYP3A4P08684 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.21■■■□□ 2.43
CYP3A4P08684 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CYP3A4P08684 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CYP3A4P08684 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CYP3A4P08684 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CYP3A4P08684 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
CYP3A4P08684 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CYP3A4P08684 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.19■■■□□ 2.42
CYP3A4P08684 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.19■■■□□ 2.42
CYP3A4P08684 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.18■■■□□ 2.42
CYP3A4P08684 AC044849.2-201ENST00000606596 710 ntBASIC30.18■■■□□ 2.42
CYP3A4P08684 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CYP3A4P08684 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CYP3A4P08684 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CYP3A4P08684 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.16■■■□□ 2.42
CYP3A4P08684 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CYP3A4P08684 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.16■■■□□ 2.42
CYP3A4P08684 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CYP3A4P08684 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CYP3A4P08684 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CYP3A4P08684 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CYP3A4P08684 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CYP3A4P08684 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
CYP3A4P08684 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CYP3A4P08684 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CYP3A4P08684 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CYP3A4P08684 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
CYP3A4P08684 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CYP3A4P08684 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.1■■■□□ 2.41
CYP3A4P08684 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CYP3A4P08684 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.1■■■□□ 2.41
CYP3A4P08684 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CYP3A4P08684 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CYP3A4P08684 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.07■■■□□ 2.4
CYP3A4P08684 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.07■■■□□ 2.4
CYP3A4P08684 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP3A4P08684 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP3A4P08684 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CYP3A4P08684 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CYP3A4P08684 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CYP3A4P08684 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.05■■■□□ 2.4
CYP3A4P08684 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CYP3A4P08684 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CYP3A4P08684 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.04■■■□□ 2.4
CYP3A4P08684 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CYP3A4P08684 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CYP3A4P08684 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CYP3A4P08684 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CYP3A4P08684 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.03■■■□□ 2.4
CYP3A4P08684 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.03■■■□□ 2.4
CYP3A4P08684 AC108673.1-201ENST00000510422 1159 ntBASIC30.03■■■□□ 2.4
CYP3A4P08684 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
CYP3A4P08684 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CYP3A4P08684 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CYP3A4P08684 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
CYP3A4P08684 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30■■■□□ 2.39
CYP3A4P08684 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30■■■□□ 2.39
CYP3A4P08684 MIR6090-201ENST00000622481 60 ntBASIC30■■■□□ 2.39
CYP3A4P08684 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP3A4P08684 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP3A4P08684 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CYP3A4P08684 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CYP3A4P08684 AL135925.1-201ENST00000605920 1701 ntBASIC29.97■■■□□ 2.39
CYP3A4P08684 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.97■■■□□ 2.39
CYP3A4P08684 AC010864.1-201ENST00000609407 1511 ntBASIC29.96■■■□□ 2.39
CYP3A4P08684 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms