Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.88■□□□□ 0.93
SCGB2A1O75556 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SCGB2A1O75556 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCGB2A1O75556 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCGB2A1O75556 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCGB2A1O75556 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCGB2A1O75556 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
SCGB2A1O75556 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCGB2A1O75556 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCGB2A1O75556 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCGB2A1O75556 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCGB2A1O75556 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCGB2A1O75556 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCGB2A1O75556 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCGB2A1O75556 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCGB2A1O75556 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCGB2A1O75556 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCGB2A1O75556 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCGB2A1O75556 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCGB2A1O75556 AL161658.1-201ENST00000623641 1967 ntBASIC20.81■□□□□ 0.92
SCGB2A1O75556 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCGB2A1O75556 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCGB2A1O75556 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCGB2A1O75556 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCGB2A1O75556 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCGB2A1O75556 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.78■□□□□ 0.92
SCGB2A1O75556 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCGB2A1O75556 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.78■□□□□ 0.92
SCGB2A1O75556 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCGB2A1O75556 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
SCGB2A1O75556 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SCGB2A1O75556 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCGB2A1O75556 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCGB2A1O75556 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCGB2A1O75556 WASH5P-204ENST00000632292 975 ntBASIC20.75■□□□□ 0.91
SCGB2A1O75556 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCGB2A1O75556 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SCGB2A1O75556 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.74■□□□□ 0.91
SCGB2A1O75556 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCGB2A1O75556 ABCB10P1-201ENST00000614297 2181 ntBASIC20.73■□□□□ 0.91
SCGB2A1O75556 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCGB2A1O75556 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCGB2A1O75556 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCGB2A1O75556 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCGB2A1O75556 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCGB2A1O75556 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCGB2A1O75556 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCGB2A1O75556 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCGB2A1O75556 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCGB2A1O75556 AL133380.1-201ENST00000506013 324 ntBASIC20.71■□□□□ 0.91
SCGB2A1O75556 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCGB2A1O75556 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCGB2A1O75556 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.69■□□□□ 0.9
SCGB2A1O75556 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCGB2A1O75556 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCGB2A1O75556 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCGB2A1O75556 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SCGB2A1O75556 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.68■□□□□ 0.9
SCGB2A1O75556 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCGB2A1O75556 RARRES2P7-201ENST00000567349 469 ntBASIC20.67■□□□□ 0.9
SCGB2A1O75556 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCGB2A1O75556 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SCGB2A1O75556 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
SCGB2A1O75556 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCGB2A1O75556 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.65■□□□□ 0.9
SCGB2A1O75556 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCGB2A1O75556 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCGB2A1O75556 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCGB2A1O75556 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCGB2A1O75556 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SCGB2A1O75556 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCGB2A1O75556 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCGB2A1O75556 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCGB2A1O75556 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCGB2A1O75556 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCGB2A1O75556 ST7-AS1-201ENST00000456775 1889 ntBASIC20.63■□□□□ 0.89
SCGB2A1O75556 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCGB2A1O75556 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCGB2A1O75556 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCGB2A1O75556 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.62■□□□□ 0.89
SCGB2A1O75556 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCGB2A1O75556 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCGB2A1O75556 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCGB2A1O75556 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCGB2A1O75556 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SCGB2A1O75556 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCGB2A1O75556 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCGB2A1O75556 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCGB2A1O75556 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.6■□□□□ 0.89
SCGB2A1O75556 AL135925.1-201ENST00000605920 1701 ntBASIC20.6■□□□□ 0.89
SCGB2A1O75556 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCGB2A1O75556 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCGB2A1O75556 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCGB2A1O75556 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCGB2A1O75556 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCGB2A1O75556 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SCGB2A1O75556 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCGB2A1O75556 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCGB2A1O75556 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCGB2A1O75556 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms