Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.02■■□□□ 1.12
MSGN1A6NI15 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MSGN1A6NI15 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.02■■□□□ 1.12
MSGN1A6NI15 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
MSGN1A6NI15 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MSGN1A6NI15 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MSGN1A6NI15 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MSGN1A6NI15 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MSGN1A6NI15 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
MSGN1A6NI15 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MSGN1A6NI15 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MSGN1A6NI15 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
MSGN1A6NI15 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
MSGN1A6NI15 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MSGN1A6NI15 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.98■■□□□ 1.11
MSGN1A6NI15 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.98■■□□□ 1.11
MSGN1A6NI15 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MSGN1A6NI15 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MSGN1A6NI15 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.97■■□□□ 1.11
MSGN1A6NI15 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.97■■□□□ 1.11
MSGN1A6NI15 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSGN1A6NI15 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSGN1A6NI15 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.95■■□□□ 1.1
MSGN1A6NI15 AC142086.6-201ENST00000621154 1765 ntBASIC21.95■■□□□ 1.1
MSGN1A6NI15 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSGN1A6NI15 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
MSGN1A6NI15 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSGN1A6NI15 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
MSGN1A6NI15 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
MSGN1A6NI15 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
MSGN1A6NI15 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSGN1A6NI15 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.93■■□□□ 1.1
MSGN1A6NI15 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.93■■□□□ 1.1
MSGN1A6NI15 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.92■■□□□ 1.1
MSGN1A6NI15 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSGN1A6NI15 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSGN1A6NI15 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MSGN1A6NI15 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSGN1A6NI15 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSGN1A6NI15 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSGN1A6NI15 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.91■■□□□ 1.1
MSGN1A6NI15 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSGN1A6NI15 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSGN1A6NI15 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSGN1A6NI15 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSGN1A6NI15 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSGN1A6NI15 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSGN1A6NI15 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
MSGN1A6NI15 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MSGN1A6NI15 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSGN1A6NI15 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSGN1A6NI15 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
MSGN1A6NI15 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSGN1A6NI15 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.87■■□□□ 1.09
MSGN1A6NI15 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
MSGN1A6NI15 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSGN1A6NI15 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSGN1A6NI15 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSGN1A6NI15 AC135731.1-201ENST00000569415 2548 ntBASIC21.85■■□□□ 1.09
MSGN1A6NI15 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSGN1A6NI15 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MSGN1A6NI15 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSGN1A6NI15 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.83■■□□□ 1.08
MSGN1A6NI15 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSGN1A6NI15 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
MSGN1A6NI15 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSGN1A6NI15 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSGN1A6NI15 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
MSGN1A6NI15 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSGN1A6NI15 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MSGN1A6NI15 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSGN1A6NI15 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.81■■□□□ 1.08
MSGN1A6NI15 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
MSGN1A6NI15 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSGN1A6NI15 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.79■■□□□ 1.08
MSGN1A6NI15 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.79■■□□□ 1.08
MSGN1A6NI15 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MSGN1A6NI15 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSGN1A6NI15 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSGN1A6NI15 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSGN1A6NI15 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSGN1A6NI15 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSGN1A6NI15 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSGN1A6NI15 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
MSGN1A6NI15 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MSGN1A6NI15 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.76■■□□□ 1.07
MSGN1A6NI15 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSGN1A6NI15 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSGN1A6NI15 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.74■■□□□ 1.07
MSGN1A6NI15 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSGN1A6NI15 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSGN1A6NI15 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSGN1A6NI15 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.73■■□□□ 1.07
MSGN1A6NI15 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSGN1A6NI15 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSGN1A6NI15 AL121749.1-202ENST00000609313 2153 ntBASIC21.73■■□□□ 1.07
MSGN1A6NI15 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MSGN1A6NI15 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSGN1A6NI15 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSGN1A6NI15 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms