Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV4S1A1TA0A5B7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TCRBV4S1A1TA0A5B7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.3■■□□□ 1
TCRBV4S1A1TA0A5B7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.3■■□□□ 1
TCRBV4S1A1TA0A5B7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV4S1A1TA0A5B7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCRBV4S1A1TA0A5B7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.29■■□□□ 1
TCRBV4S1A1TA0A5B7 MIR3665-201ENST00000578708 105 ntBASIC21.29■■□□□ 1
TCRBV4S1A1TA0A5B7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TCRBV4S1A1TA0A5B7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.28■■□□□ 1
TCRBV4S1A1TA0A5B7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV4S1A1TA0A5B7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TCRBV4S1A1TA0A5B7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TCRBV4S1A1TA0A5B7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
TCRBV4S1A1TA0A5B7 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.26■□□□□ 0.99
TCRBV4S1A1TA0A5B7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV4S1A1TA0A5B7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TCRBV4S1A1TA0A5B7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV4S1A1TA0A5B7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TCRBV4S1A1TA0A5B7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV4S1A1TA0A5B7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TCRBV4S1A1TA0A5B7 MIR762-201ENST00000390236 83 ntBASIC21.24■□□□□ 0.99
TCRBV4S1A1TA0A5B7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV4S1A1TA0A5B7 WASH5P-204ENST00000632292 975 ntBASIC21.24■□□□□ 0.99
TCRBV4S1A1TA0A5B7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV4S1A1TA0A5B7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV4S1A1TA0A5B7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV4S1A1TA0A5B7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV4S1A1TA0A5B7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV4S1A1TA0A5B7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV4S1A1TA0A5B7 ABCB10P3-201ENST00000561950 2166 ntBASIC21.2■□□□□ 0.98
TCRBV4S1A1TA0A5B7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV4S1A1TA0A5B7 AC005559.1-201ENST00000589661 871 ntBASIC21.2■□□□□ 0.98
TCRBV4S1A1TA0A5B7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV4S1A1TA0A5B7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV4S1A1TA0A5B7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV4S1A1TA0A5B7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV4S1A1TA0A5B7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV4S1A1TA0A5B7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TCRBV4S1A1TA0A5B7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TCRBV4S1A1TA0A5B7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.18■□□□□ 0.98
TCRBV4S1A1TA0A5B7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV4S1A1TA0A5B7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV4S1A1TA0A5B7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV4S1A1TA0A5B7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV4S1A1TA0A5B7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TCRBV4S1A1TA0A5B7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.17■□□□□ 0.98
TCRBV4S1A1TA0A5B7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TCRBV4S1A1TA0A5B7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 DUX4L28-201ENST00000623687 678 ntBASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
TCRBV4S1A1TA0A5B7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV4S1A1TA0A5B7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.15■□□□□ 0.98
TCRBV4S1A1TA0A5B7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
TCRBV4S1A1TA0A5B7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
TCRBV4S1A1TA0A5B7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV4S1A1TA0A5B7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV4S1A1TA0A5B7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TCRBV4S1A1TA0A5B7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.13■□□□□ 0.97
TCRBV4S1A1TA0A5B7 AC087741.3-201ENST00000624270 1347 ntBASIC21.12■□□□□ 0.97
TCRBV4S1A1TA0A5B7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV4S1A1TA0A5B7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TCRBV4S1A1TA0A5B7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV4S1A1TA0A5B7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV4S1A1TA0A5B7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV4S1A1TA0A5B7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV4S1A1TA0A5B7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV4S1A1TA0A5B7 AC044849.2-201ENST00000606596 710 ntBASIC21.1■□□□□ 0.97
TCRBV4S1A1TA0A5B7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV4S1A1TA0A5B7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV4S1A1TA0A5B7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TCRBV4S1A1TA0A5B7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV4S1A1TA0A5B7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV4S1A1TA0A5B7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TCRBV4S1A1TA0A5B7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV4S1A1TA0A5B7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV4S1A1TA0A5B7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV4S1A1TA0A5B7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV4S1A1TA0A5B7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV4S1A1TA0A5B7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV4S1A1TA0A5B7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV4S1A1TA0A5B7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV4S1A1TA0A5B7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV4S1A1TA0A5B7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.05■□□□□ 0.96
TCRBV4S1A1TA0A5B7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV4S1A1TA0A5B7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV4S1A1TA0A5B7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV4S1A1TA0A5B7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TCRBV4S1A1TA0A5B7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.04■□□□□ 0.96
TCRBV4S1A1TA0A5B7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV4S1A1TA0A5B7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TCRBV4S1A1TA0A5B7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV4S1A1TA0A5B7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV4S1A1TA0A5B7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV4S1A1TA0A5B7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV4S1A1TA0A5B7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms