Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF103-CHMP3A0A140T963 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
RNF103-CHMP3A0A140T963 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
RNF103-CHMP3A0A140T963 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF103-CHMP3A0A140T963 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RNF103-CHMP3A0A140T963 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF103-CHMP3A0A140T963 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.39■■□□□ 1.65
RNF103-CHMP3A0A140T963 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNF103-CHMP3A0A140T963 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF103-CHMP3A0A140T963 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF103-CHMP3A0A140T963 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RNF103-CHMP3A0A140T963 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF103-CHMP3A0A140T963 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF103-CHMP3A0A140T963 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF103-CHMP3A0A140T963 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF103-CHMP3A0A140T963 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF103-CHMP3A0A140T963 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF103-CHMP3A0A140T963 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF103-CHMP3A0A140T963 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF103-CHMP3A0A140T963 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF103-CHMP3A0A140T963 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF103-CHMP3A0A140T963 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF103-CHMP3A0A140T963 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF103-CHMP3A0A140T963 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF103-CHMP3A0A140T963 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF103-CHMP3A0A140T963 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF103-CHMP3A0A140T963 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
RNF103-CHMP3A0A140T963 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.29■■□□□ 1.64
RNF103-CHMP3A0A140T963 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF103-CHMP3A0A140T963 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.28■■□□□ 1.64
RNF103-CHMP3A0A140T963 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF103-CHMP3A0A140T963 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.27■■□□□ 1.64
RNF103-CHMP3A0A140T963 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.27■■□□□ 1.64
RNF103-CHMP3A0A140T963 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNF103-CHMP3A0A140T963 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF103-CHMP3A0A140T963 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF103-CHMP3A0A140T963 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF103-CHMP3A0A140T963 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RNF103-CHMP3A0A140T963 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF103-CHMP3A0A140T963 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RNF103-CHMP3A0A140T963 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
RNF103-CHMP3A0A140T963 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.23■■□□□ 1.63
RNF103-CHMP3A0A140T963 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF103-CHMP3A0A140T963 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF103-CHMP3A0A140T963 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF103-CHMP3A0A140T963 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF103-CHMP3A0A140T963 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF103-CHMP3A0A140T963 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF103-CHMP3A0A140T963 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF103-CHMP3A0A140T963 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RNF103-CHMP3A0A140T963 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF103-CHMP3A0A140T963 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF103-CHMP3A0A140T963 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF103-CHMP3A0A140T963 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RNF103-CHMP3A0A140T963 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.18■■□□□ 1.62
RNF103-CHMP3A0A140T963 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF103-CHMP3A0A140T963 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.17■■□□□ 1.62
RNF103-CHMP3A0A140T963 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF103-CHMP3A0A140T963 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF103-CHMP3A0A140T963 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF103-CHMP3A0A140T963 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF103-CHMP3A0A140T963 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF103-CHMP3A0A140T963 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.15■■□□□ 1.62
RNF103-CHMP3A0A140T963 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF103-CHMP3A0A140T963 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RNF103-CHMP3A0A140T963 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.14■■□□□ 1.62
RNF103-CHMP3A0A140T963 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF103-CHMP3A0A140T963 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RNF103-CHMP3A0A140T963 AL133380.1-201ENST00000506013 324 ntBASIC25.14■■□□□ 1.62
RNF103-CHMP3A0A140T963 ST7-AS1-201ENST00000456775 1889 ntBASIC25.14■■□□□ 1.61
RNF103-CHMP3A0A140T963 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RNF103-CHMP3A0A140T963 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF103-CHMP3A0A140T963 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF103-CHMP3A0A140T963 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF103-CHMP3A0A140T963 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF103-CHMP3A0A140T963 WASH5P-204ENST00000632292 975 ntBASIC25.12■■□□□ 1.61
RNF103-CHMP3A0A140T963 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF103-CHMP3A0A140T963 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF103-CHMP3A0A140T963 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.11■■□□□ 1.61
RNF103-CHMP3A0A140T963 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF103-CHMP3A0A140T963 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RNF103-CHMP3A0A140T963 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF103-CHMP3A0A140T963 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
RNF103-CHMP3A0A140T963 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF103-CHMP3A0A140T963 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF103-CHMP3A0A140T963 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF103-CHMP3A0A140T963 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF103-CHMP3A0A140T963 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF103-CHMP3A0A140T963 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF103-CHMP3A0A140T963 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF103-CHMP3A0A140T963 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF103-CHMP3A0A140T963 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RNF103-CHMP3A0A140T963 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF103-CHMP3A0A140T963 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.02■■□□□ 1.6
RNF103-CHMP3A0A140T963 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF103-CHMP3A0A140T963 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF103-CHMP3A0A140T963 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
RNF103-CHMP3A0A140T963 RARRES2P7-201ENST00000567349 469 ntBASIC25.01■■□□□ 1.59
RNF103-CHMP3A0A140T963 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF103-CHMP3A0A140T963 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms