Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV21A0A0B4J279 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TRAV21A0A0B4J279 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV21A0A0B4J279 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
TRAV21A0A0B4J279 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV21A0A0B4J279 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV21A0A0B4J279 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAV21A0A0B4J279 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV21A0A0B4J279 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV21A0A0B4J279 AC139426.1-201ENST00000568218 2529 ntBASIC19.71■□□□□ 0.75
TRAV21A0A0B4J279 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV21A0A0B4J279 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV21A0A0B4J279 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV21A0A0B4J279 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAV21A0A0B4J279 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV21A0A0B4J279 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV21A0A0B4J279 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV21A0A0B4J279 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV21A0A0B4J279 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV21A0A0B4J279 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV21A0A0B4J279 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV21A0A0B4J279 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV21A0A0B4J279 AL135925.1-201ENST00000605920 1701 ntBASIC19.66■□□□□ 0.74
TRAV21A0A0B4J279 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV21A0A0B4J279 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAV21A0A0B4J279 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV21A0A0B4J279 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV21A0A0B4J279 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV21A0A0B4J279 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV21A0A0B4J279 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRAV21A0A0B4J279 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV21A0A0B4J279 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV21A0A0B4J279 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV21A0A0B4J279 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV21A0A0B4J279 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV21A0A0B4J279 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV21A0A0B4J279 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRAV21A0A0B4J279 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV21A0A0B4J279 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV21A0A0B4J279 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV21A0A0B4J279 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV21A0A0B4J279 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV21A0A0B4J279 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV21A0A0B4J279 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRAV21A0A0B4J279 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV21A0A0B4J279 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV21A0A0B4J279 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRAV21A0A0B4J279 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV21A0A0B4J279 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV21A0A0B4J279 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV21A0A0B4J279 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV21A0A0B4J279 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV21A0A0B4J279 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV21A0A0B4J279 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV21A0A0B4J279 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV21A0A0B4J279 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV21A0A0B4J279 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV21A0A0B4J279 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV21A0A0B4J279 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV21A0A0B4J279 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV21A0A0B4J279 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV21A0A0B4J279 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.54■□□□□ 0.72
TRAV21A0A0B4J279 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV21A0A0B4J279 WASH5P-204ENST00000632292 975 ntBASIC19.54■□□□□ 0.72
TRAV21A0A0B4J279 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV21A0A0B4J279 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV21A0A0B4J279 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV21A0A0B4J279 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV21A0A0B4J279 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV21A0A0B4J279 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV21A0A0B4J279 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV21A0A0B4J279 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV21A0A0B4J279 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV21A0A0B4J279 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV21A0A0B4J279 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV21A0A0B4J279 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV21A0A0B4J279 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV21A0A0B4J279 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV21A0A0B4J279 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV21A0A0B4J279 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV21A0A0B4J279 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV21A0A0B4J279 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV21A0A0B4J279 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV21A0A0B4J279 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV21A0A0B4J279 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV21A0A0B4J279 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV21A0A0B4J279 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV21A0A0B4J279 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV21A0A0B4J279 AL133380.1-201ENST00000506013 324 ntBASIC19.44■□□□□ 0.7
TRAV21A0A0B4J279 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV21A0A0B4J279 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV21A0A0B4J279 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV21A0A0B4J279 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 AC142086.6-201ENST00000621154 1765 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms