Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV12-1A0A0B4J245 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV12-1A0A0B4J245 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRAV12-1A0A0B4J245 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV12-1A0A0B4J245 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAV12-1A0A0B4J245 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV12-1A0A0B4J245 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV12-1A0A0B4J245 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV12-1A0A0B4J245 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV12-1A0A0B4J245 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV12-1A0A0B4J245 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV12-1A0A0B4J245 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV12-1A0A0B4J245 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRAV12-1A0A0B4J245 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV12-1A0A0B4J245 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV12-1A0A0B4J245 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV12-1A0A0B4J245 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV12-1A0A0B4J245 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV12-1A0A0B4J245 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV12-1A0A0B4J245 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV12-1A0A0B4J245 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV12-1A0A0B4J245 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV12-1A0A0B4J245 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV12-1A0A0B4J245 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV12-1A0A0B4J245 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV12-1A0A0B4J245 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV12-1A0A0B4J245 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV12-1A0A0B4J245 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV12-1A0A0B4J245 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV12-1A0A0B4J245 AL121749.1-202ENST00000609313 2153 ntBASIC18.74■□□□□ 0.59
TRAV12-1A0A0B4J245 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV12-1A0A0B4J245 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRAV12-1A0A0B4J245 AC135731.1-201ENST00000569415 2548 ntBASIC18.73■□□□□ 0.59
TRAV12-1A0A0B4J245 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
TRAV12-1A0A0B4J245 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV12-1A0A0B4J245 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV12-1A0A0B4J245 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV12-1A0A0B4J245 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV12-1A0A0B4J245 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRAV12-1A0A0B4J245 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV12-1A0A0B4J245 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV12-1A0A0B4J245 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV12-1A0A0B4J245 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-1A0A0B4J245 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-1A0A0B4J245 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-1A0A0B4J245 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-1A0A0B4J245 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV12-1A0A0B4J245 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV12-1A0A0B4J245 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV12-1A0A0B4J245 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV12-1A0A0B4J245 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV12-1A0A0B4J245 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TRAV12-1A0A0B4J245 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV12-1A0A0B4J245 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV12-1A0A0B4J245 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV12-1A0A0B4J245 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV12-1A0A0B4J245 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV12-1A0A0B4J245 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV12-1A0A0B4J245 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV12-1A0A0B4J245 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV12-1A0A0B4J245 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV12-1A0A0B4J245 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV12-1A0A0B4J245 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-1A0A0B4J245 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAV12-1A0A0B4J245 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV12-1A0A0B4J245 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV12-1A0A0B4J245 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV12-1A0A0B4J245 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV12-1A0A0B4J245 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV12-1A0A0B4J245 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV12-1A0A0B4J245 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-1A0A0B4J245 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-1A0A0B4J245 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV12-1A0A0B4J245 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-1A0A0B4J245 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-1A0A0B4J245 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-1A0A0B4J245 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-1A0A0B4J245 AL135925.1-201ENST00000605920 1701 ntBASIC18.59■□□□□ 0.57
TRAV12-1A0A0B4J245 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-1A0A0B4J245 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV12-1A0A0B4J245 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV12-1A0A0B4J245 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-1A0A0B4J245 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRAV12-1A0A0B4J245 DRD5P2-201ENST00000421395 2012 ntBASIC18.57■□□□□ 0.56
TRAV12-1A0A0B4J245 AC015813.7-201ENST00000623294 581 ntBASIC18.57■□□□□ 0.56
TRAV12-1A0A0B4J245 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-1A0A0B4J245 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-1A0A0B4J245 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-1A0A0B4J245 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-1A0A0B4J245 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV12-1A0A0B4J245 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.56■□□□□ 0.56
TRAV12-1A0A0B4J245 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV12-1A0A0B4J245 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV12-1A0A0B4J245 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-1A0A0B4J245 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-1A0A0B4J245 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-1A0A0B4J245 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV12-1A0A0B4J245 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV12-1A0A0B4J245 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV12-1A0A0B4J245 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms