Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFSF12-TNFSF13A0A0A6YY99 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.27■■□□□ 1.48
TNFSF12-TNFSF13A0A0A6YY99 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.27■■□□□ 1.48
TNFSF12-TNFSF13A0A0A6YY99 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.27■■□□□ 1.48
TNFSF12-TNFSF13A0A0A6YY99 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TNFSF12-TNFSF13A0A0A6YY99 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 AL162393.1-201ENST00000437852 946 ntBASIC24.26■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.25■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.25■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.22■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.22■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TNFSF12-TNFSF13A0A0A6YY99 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.2■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.17■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 MIR762-201ENST00000390236 83 ntBASIC24.15■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.15■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.15■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
TNFSF12-TNFSF13A0A0A6YY99 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 MIR3665-201ENST00000578708 105 ntBASIC24.13■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.1■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 DUX4L28-201ENST00000623687 678 ntBASIC24.08■■□□□ 1.45
TNFSF12-TNFSF13A0A0A6YY99 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.06■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 AL135925.1-201ENST00000605920 1701 ntBASIC24.05■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 AC005559.1-201ENST00000589661 871 ntBASIC24.05■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.04■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.04■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 AC087741.3-201ENST00000624270 1347 ntBASIC24.03■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.02■■□□□ 1.44
TNFSF12-TNFSF13A0A0A6YY99 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.01■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 ST7-AS1-201ENST00000456775 1889 ntBASIC23.97■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.97■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.97■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.95■■□□□ 1.43
TNFSF12-TNFSF13A0A0A6YY99 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.94■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.93■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 AC010864.1-201ENST00000609407 1511 ntBASIC23.93■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 ABCB10P1-201ENST00000614297 2181 ntBASIC23.92■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFSF12-TNFSF13A0A0A6YY99 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms