Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ECHDC1Q9NTX5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 POU5F1P4-201ENST00000413175 1085 ntBASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ECHDC1Q9NTX5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ECHDC1Q9NTX5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ECHDC1Q9NTX5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 FEM1AP4-201ENST00000443167 1987 ntBASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
ECHDC1Q9NTX5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 KRT18P20-201ENST00000548986 1279 ntBASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 SLC7A5P2-201ENST00000553010 536 ntBASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 AL024507.2-201ENST00000606070 2574 ntBASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.65■■□□□ 1.7
ECHDC1Q9NTX5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.64■■□□□ 1.7
ECHDC1Q9NTX5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ECHDC1Q9NTX5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ECHDC1Q9NTX5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
ECHDC1Q9NTX5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ECHDC1Q9NTX5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
ECHDC1Q9NTX5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ECHDC1Q9NTX5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.62■■□□□ 1.69
ECHDC1Q9NTX5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms