Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC52A3Q9NQ40 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 AC121338.2-201ENST00000622535 1744 ntBASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC52A3Q9NQ40 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 AC055733.4-201ENST00000638462 1354 ntBASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC52A3Q9NQ40 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 AC007225.1-201ENST00000566331 1836 ntBASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SLC52A3Q9NQ40 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC52A3Q9NQ40 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 AL162377.1-201ENST00000618844 1793 ntBASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 AC020907.5-201ENST00000624372 1936 ntBASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms