Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEUROD4Q9HD90 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 AC012414.1-201ENST00000556676 535 ntBASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 AL354811.1-201ENST00000610286 706 ntBASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NEUROD4Q9HD90 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.79■□□□□ 0.76
NEUROD4Q9HD90 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NEUROD4Q9HD90 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEUROD4Q9HD90 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NEUROD4Q9HD90 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NEUROD4Q9HD90 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 AL358852.1-201ENST00000623174 1268 ntBASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NEUROD4Q9HD90 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms