Protein–RNA interactions for Protein: Q8N443

RIBC1, RIB43A-like with coiled-coils protein 1, humanhuman

Predicted RBP Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIBC1Q8N443 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIBC1Q8N443 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIBC1Q8N443 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.14■□□□□ 0.97
RIBC1Q8N443 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
RIBC1Q8N443 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIBC1Q8N443 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RIBC1Q8N443 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIBC1Q8N443 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.14■□□□□ 0.97
RIBC1Q8N443 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIBC1Q8N443 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 AC239859.2-201ENST00000444165 318 ntBASIC21.13■□□□□ 0.97
RIBC1Q8N443 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIBC1Q8N443 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.13■□□□□ 0.97
RIBC1Q8N443 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIBC1Q8N443 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.12■□□□□ 0.97
RIBC1Q8N443 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 AC027702.1-201ENST00000563810 1770 ntBASIC21.11■□□□□ 0.97
RIBC1Q8N443 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 AC121338.2-201ENST00000622535 1744 ntBASIC21.11■□□□□ 0.97
RIBC1Q8N443 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
RIBC1Q8N443 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIBC1Q8N443 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.1■□□□□ 0.97
RIBC1Q8N443 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
RIBC1Q8N443 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 AC020907.5-201ENST00000624372 1936 ntBASIC21.1■□□□□ 0.97
RIBC1Q8N443 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.1■□□□□ 0.97
RIBC1Q8N443 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.1■□□□□ 0.97
RIBC1Q8N443 AC010525.1-201ENST00000585559 441 ntBASIC21.1■□□□□ 0.97
RIBC1Q8N443 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RIBC1Q8N443 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RIBC1Q8N443 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIBC1Q8N443 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.09■□□□□ 0.97
RIBC1Q8N443 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIBC1Q8N443 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RIBC1Q8N443 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
RIBC1Q8N443 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIBC1Q8N443 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIBC1Q8N443 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.09■□□□□ 0.97
RIBC1Q8N443 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RIBC1Q8N443 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIBC1Q8N443 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIBC1Q8N443 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms