Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APLFQ8IW19 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.7■□□□□ 0.9
APLFQ8IW19 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
APLFQ8IW19 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.7■□□□□ 0.9
APLFQ8IW19 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
APLFQ8IW19 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.7■□□□□ 0.9
APLFQ8IW19 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
APLFQ8IW19 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APLFQ8IW19 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.69■□□□□ 0.9
APLFQ8IW19 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.69■□□□□ 0.9
APLFQ8IW19 TERF1P2-201ENST00000583350 1212 ntBASIC20.69■□□□□ 0.9
APLFQ8IW19 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APLFQ8IW19 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APLFQ8IW19 LINC02228-203ENST00000641970 1355 ntBASIC20.69■□□□□ 0.9
APLFQ8IW19 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APLFQ8IW19 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
APLFQ8IW19 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.68■□□□□ 0.9
APLFQ8IW19 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.68■□□□□ 0.9
APLFQ8IW19 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.68■□□□□ 0.9
APLFQ8IW19 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.68■□□□□ 0.9
APLFQ8IW19 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.68■□□□□ 0.9
APLFQ8IW19 KRT18P14-201ENST00000534205 1250 ntBASIC20.68■□□□□ 0.9
APLFQ8IW19 DUX4L4-201ENST00000566884 1269 ntBASIC20.68■□□□□ 0.9
APLFQ8IW19 NTF6G-201ENST00000591094 616 ntBASIC20.68■□□□□ 0.9
APLFQ8IW19 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.68■□□□□ 0.9
APLFQ8IW19 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
APLFQ8IW19 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.67■□□□□ 0.9
APLFQ8IW19 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.67■□□□□ 0.9
APLFQ8IW19 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.67■□□□□ 0.9
APLFQ8IW19 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
APLFQ8IW19 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 AC004911.1-201ENST00000416316 871 ntBASIC20.67■□□□□ 0.9
APLFQ8IW19 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.67■□□□□ 0.9
APLFQ8IW19 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.67■□□□□ 0.9
APLFQ8IW19 AP005435.1-201ENST00000529293 1178 ntBASIC20.67■□□□□ 0.9
APLFQ8IW19 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.67■□□□□ 0.9
APLFQ8IW19 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
APLFQ8IW19 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
APLFQ8IW19 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APLFQ8IW19 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
APLFQ8IW19 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.66■□□□□ 0.9
APLFQ8IW19 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.66■□□□□ 0.9
APLFQ8IW19 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APLFQ8IW19 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APLFQ8IW19 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
APLFQ8IW19 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APLFQ8IW19 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms