Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 AC009086.3-201ENST00000623486 1008 ntBASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 AC241377.3-202ENST00000626088 1088 ntBASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 AC241585.3-202ENST00000628937 1088 ntBASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 AC245100.8-202ENST00000629247 1058 ntBASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXR1Q6PIV2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 C17orf82-201ENST00000623772 1530 ntBASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXR1Q6PIV2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 AC136469.2-201ENST00000623944 1028 ntBASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXR1Q6PIV2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 AC233992.3-201ENST00000607491 485 ntBASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXR1Q6PIV2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXR1Q6PIV2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
FOXR1Q6PIV2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
FOXR1Q6PIV2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
FOXR1Q6PIV2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 AC126544.1-201ENST00000580842 1059 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms