Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMGA2P52926 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HMGA2P52926 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.21■□□□□ 0.67
HMGA2P52926 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGA2P52926 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGA2P52926 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGA2P52926 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGA2P52926 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.2■□□□□ 0.66
HMGA2P52926 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.2■□□□□ 0.66
HMGA2P52926 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGA2P52926 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGA2P52926 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGA2P52926 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGA2P52926 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGA2P52926 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMGA2P52926 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGA2P52926 AC007225.1-201ENST00000566331 1836 ntBASIC19.19■□□□□ 0.66
HMGA2P52926 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
HMGA2P52926 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGA2P52926 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HMGA2P52926 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGA2P52926 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGA2P52926 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGA2P52926 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGA2P52926 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGA2P52926 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGA2P52926 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGA2P52926 MIR4466-201ENST00000606121 54 ntBASIC19.18■□□□□ 0.66
HMGA2P52926 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGA2P52926 AC027702.1-201ENST00000563810 1770 ntBASIC19.18■□□□□ 0.66
HMGA2P52926 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGA2P52926 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGA2P52926 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGA2P52926 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HMGA2P52926 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HMGA2P52926 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGA2P52926 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGA2P52926 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.17■□□□□ 0.66
HMGA2P52926 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGA2P52926 AC020907.5-201ENST00000624372 1936 ntBASIC19.17■□□□□ 0.66
HMGA2P52926 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGA2P52926 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGA2P52926 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HMGA2P52926 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HMGA2P52926 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
HMGA2P52926 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HMGA2P52926 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGA2P52926 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms