Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR4A2P43354 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NR4A2P43354 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.93■□□□□ 0.62
NR4A2P43354 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
NR4A2P43354 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NR4A2P43354 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
NR4A2P43354 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.93■□□□□ 0.62
NR4A2P43354 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.93■□□□□ 0.62
NR4A2P43354 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.93■□□□□ 0.62
NR4A2P43354 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
NR4A2P43354 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR4A2P43354 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NR4A2P43354 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
NR4A2P43354 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NR4A2P43354 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
NR4A2P43354 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 LINC01006-201ENST00000333319 2292 ntBASIC18.92■□□□□ 0.62
NR4A2P43354 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.92■□□□□ 0.62
NR4A2P43354 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.92■□□□□ 0.62
NR4A2P43354 AC097381.1-201ENST00000429019 1296 ntBASIC18.92■□□□□ 0.62
NR4A2P43354 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.92■□□□□ 0.62
NR4A2P43354 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
NR4A2P43354 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.92■□□□□ 0.62
NR4A2P43354 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR4A2P43354 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NR4A2P43354 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.92■□□□□ 0.62
NR4A2P43354 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.92■□□□□ 0.62
NR4A2P43354 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NR4A2P43354 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.91■□□□□ 0.62
NR4A2P43354 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.91■□□□□ 0.62
NR4A2P43354 IRS3P-201ENST00000223076 1006 ntBASIC18.91■□□□□ 0.62
NR4A2P43354 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.91■□□□□ 0.62
NR4A2P43354 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.91■□□□□ 0.62
NR4A2P43354 AC233992.3-201ENST00000607491 485 ntBASIC18.91■□□□□ 0.62
NR4A2P43354 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR4A2P43354 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.91■□□□□ 0.62
NR4A2P43354 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NR4A2P43354 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.91■□□□□ 0.62
NR4A2P43354 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.9■□□□□ 0.62
NR4A2P43354 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.9■□□□□ 0.62
NR4A2P43354 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.9■□□□□ 0.62
NR4A2P43354 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NR4A2P43354 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.9■□□□□ 0.62
NR4A2P43354 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NR4A2P43354 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 BX842568.3-201ENST00000418104 571 ntBASIC18.9■□□□□ 0.62
NR4A2P43354 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.9■□□□□ 0.62
NR4A2P43354 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR4A2P43354 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NR4A2P43354 AC026471.1-201ENST00000564629 3026 ntBASIC18.9■□□□□ 0.62
NR4A2P43354 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NR4A2P43354 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NR4A2P43354 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.89■□□□□ 0.61
NR4A2P43354 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.89■□□□□ 0.61
NR4A2P43354 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.89■□□□□ 0.61
NR4A2P43354 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NR4A2P43354 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR4A2P43354 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NR4A2P43354 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR4A2P43354 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR4A2P43354 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.89■□□□□ 0.61
NR4A2P43354 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.89■□□□□ 0.61
NR4A2P43354 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.89■□□□□ 0.61
NR4A2P43354 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR4A2P43354 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.89■□□□□ 0.61
NR4A2P43354 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NR4A2P43354 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR4A2P43354 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.89■□□□□ 0.61
NR4A2P43354 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NR4A2P43354 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
NR4A2P43354 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms