Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 AC133561.4-201ENST00000566112 224 ntBASIC20.96■□□□□ 0.95
CCDC189A1A4V9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC189A1A4V9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC189A1A4V9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 AP004607.7-201ENST00000527152 1677 ntBASIC20.95■□□□□ 0.94
CCDC189A1A4V9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC189A1A4V9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 AL136116.3-201ENST00000402907 1138 ntBASIC20.94■□□□□ 0.94
CCDC189A1A4V9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC189A1A4V9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC189A1A4V9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 AC233992.3-201ENST00000607491 485 ntBASIC20.92■□□□□ 0.94
CCDC189A1A4V9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC189A1A4V9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC189A1A4V9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC189A1A4V9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC189A1A4V9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms