Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1G3Q9Y6M4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 MKRN4P-201ENST00000444706 1521 ntBASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1G3Q9Y6M4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1G3Q9Y6M4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1G3Q9Y6M4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CSNK1G3Q9Y6M4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.64■□□□□ 0.9
CSNK1G3Q9Y6M4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1G3Q9Y6M4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1G3Q9Y6M4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 MIPEPP3-201ENST00000412105 444 ntBASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 TSPY20P-201ENST00000450910 630 ntBASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSNK1G3Q9Y6M4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 AC243732.1-201ENST00000612648 864 ntBASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSNK1G3Q9Y6M4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSNK1G3Q9Y6M4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 RBM17P2-201ENST00000616397 1405 ntBASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 AL591742.1-201ENST00000604433 565 ntBASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSNK1G3Q9Y6M4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms