Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
USP22Q9UPT9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP22Q9UPT9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP22Q9UPT9 AC131212.1-201ENST00000613771 668 ntBASIC19.87■□□□□ 0.77
USP22Q9UPT9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP22Q9UPT9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP22Q9UPT9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP22Q9UPT9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP22Q9UPT9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.87■□□□□ 0.77
USP22Q9UPT9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP22Q9UPT9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
USP22Q9UPT9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 MIR3621-201ENST00000580529 85 ntBASIC19.86■□□□□ 0.77
USP22Q9UPT9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.86■□□□□ 0.77
USP22Q9UPT9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP22Q9UPT9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
USP22Q9UPT9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 AL512631.2-201ENST00000604634 923 ntBASIC19.85■□□□□ 0.77
USP22Q9UPT9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
USP22Q9UPT9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.85■□□□□ 0.77
USP22Q9UPT9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
USP22Q9UPT9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
USP22Q9UPT9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP22Q9UPT9 AC006128.1-201ENST00000624704 1661 ntBASIC19.84■□□□□ 0.77
USP22Q9UPT9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.84■□□□□ 0.77
USP22Q9UPT9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP22Q9UPT9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP22Q9UPT9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP22Q9UPT9 AFG3L1P-217ENST00000557444 2447 ntBASIC19.83■□□□□ 0.77
USP22Q9UPT9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP22Q9UPT9 AL034346.1-201ENST00000568244 1277 ntBASIC19.83■□□□□ 0.77
USP22Q9UPT9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.83■□□□□ 0.77
USP22Q9UPT9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.83■□□□□ 0.77
USP22Q9UPT9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.83■□□□□ 0.77
USP22Q9UPT9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP22Q9UPT9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP22Q9UPT9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP22Q9UPT9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP22Q9UPT9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.83■□□□□ 0.76
USP22Q9UPT9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP22Q9UPT9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP22Q9UPT9 AP006587.3-201ENST00000525742 1516 ntBASIC19.82■□□□□ 0.76
USP22Q9UPT9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms