Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 AL391422.3-201ENST00000603791 2761 ntBASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.11■□□□□ 0.81
PRPF19Q9UMS4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 AL034346.1-201ENST00000568244 1277 ntBASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 AC003102.1-202ENST00000563394 1796 ntBASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRPF19Q9UMS4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 AC021242.3-201ENST00000607598 1377 ntBASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 AC027702.1-201ENST00000563810 1770 ntBASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 ATP5G2P3-201ENST00000429083 425 ntBASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.09■□□□□ 0.81
PRPF19Q9UMS4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PRPF19Q9UMS4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 AC020907.5-201ENST00000624372 1936 ntBASIC20.08■□□□□ 0.8
PRPF19Q9UMS4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 AC004987.1-201ENST00000428627 508 ntBASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRPF19Q9UMS4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 AC103724.3-201ENST00000564481 992 ntBASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPF19Q9UMS4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRPF19Q9UMS4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms